RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DDX53Q86TM3 631 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 RBM23Q86U06 439 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 VPS52Q8N1B4 723 aa15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 B3GALT6Q96L58 329 aa15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 FAM213AQ9BRX8 229 aa15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 PUF60Q9UHX1 559 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-207ENST00000595631 BRWD1Q9NSI6 2320 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 TCF20Q9UGU0 1960 aaKnown RBP15□□□□□ -0.01
SHKBP1-207ENST00000595631 TULP1O00294 542 aaPredicted RBP15□□□□□ -0.01
SHKBP1-207ENST00000595631 CLIC2O15247 247 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 RHOBTB3O94955 611 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 NFICP08651 508 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 GARTP22102 1010 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 CA8P35219 290 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 UBE2HP62256 183 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 HYAL1Q12794 435 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 KANK3Q6NY19 840 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 TMC7Q7Z402 723 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 C3orf58Q8NDZ4 430 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 FAM84AQ96KN4 292 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 TIGD1Q96MW7 591 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 COLEC11Q9BWP8 271 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 GPR62Q9BZJ7 368 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 IGFLR1Q9H665 355 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 MAPK8IP1Q9UQF2 711 aa15□□□□□ -0.01
SHKBP1-207ENST00000595631 MTCL1Q9Y4B5 1905 aaKnown RBP15□□□□□ -0.01
SHKBP1-207ENST00000595631 I3L4J1 428 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 PER2O15055 1255 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 LINC01565O15544 149 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 KINO60870 393 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 EFEMP2O95967 443 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 NRIP1P48552 1158 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 RBM10P98175 930 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 PSMD2Q13200 908 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 KYAT1Q16773 422 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 UPP1Q16831 310 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 KNOP1Q1ED39 458 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 JADE1Q6IE81 842 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 FUT10Q6P4F1 479 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 CD300LGQ6UXG3 332 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 SMYD4Q8IYR2 804 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 PLEKHA5Q9HAU0 1116 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 AGPAT3Q9NRZ7 376 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 HSPBP1Q9NZL4 362 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 ADAM28Q9UKQ2 775 aa14.99□□□□□ -0.01
SHKBP1-207ENST00000595631 CARNS1A5YM72 827 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 C2CD2LO14523 706 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 EXTL3O43909 919 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 TADA2AO75478 443 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CXCL14O95715 111 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 ADRB2P07550 413 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CTSAP10619 480 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CYP2J2P51589 502 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 KCNB1Q14721 858 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 ZBTB6Q15916 424 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CLEC17AQ6ZS10 378 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CBWD2Q8IUF1 395 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 RNF168Q8IYW5 571 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 GPD1LQ8N335 351 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 SLC38A7Q9NVC3 462 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 PCDHA5Q9Y5H7 936 aa14.98□□□□□ -0.01
SHKBP1-207ENST00000595631 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 C2orf71A6NGG8 1288 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 PODXLO00592 558 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 PPEF2O14830 753 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 B3GAT3O94766 335 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 SOD2P04179 222 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 BRCC3P46736 316 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 TFF2Q03403 129 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 PTPN14Q15678 1187 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 ISM2Q6H9L7 571 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 BRSK2Q8IWQ3 736 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 VN1R2Q8NFZ6 395 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 UROC1Q96N76 676 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 KCTD10Q9H3F6 313 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 TLE6Q9H808 572 aa14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-207ENST00000595631 GLP2RO95838 553 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 LDHAP00338 332 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 DLX2Q07687 328 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 TMEM132DQ14C87 1099 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 DUSP6Q16828 381 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 RTP2Q5QGT7 225 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 FAM171A1Q5VUB5 890 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 SCARA3Q6AZY7 606 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 PDE12Q6L8Q7 609 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 MRPL43Q8N983 215 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 UBE2ZQ9H832 354 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms