RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 B3GALT6Q96L58 329 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 INO80BQ9C086 356 aaPredicted RBP14.16□□□□□ -0.14
SCAF1-202ENST00000595242 ZMYND12Q9H0C1 365 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 RSAD1Q9HA92 442 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 CBX8Q9HC52 389 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 KIAA1468Q9P260 1216 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 MRPS17Q9Y2R5 130 aaKnown RBP14.16□□□□□ -0.14
SCAF1-202ENST00000595242 IGF2RP11717 2491 aa14.16□□□□□ -0.14
SCAF1-202ENST00000595242 ZNF862O60290 1169 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 OR1G1P47890 313 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 ADCY7P51828 1080 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 SIM2Q14190 667 aaPredicted RBP14.15□□□□□ -0.14
SCAF1-202ENST00000595242 PPP2R5DQ14738 602 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 IQCB1Q15051 598 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 CATSPER4Q7RTX7 472 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 TEX2Q8IWB9 1127 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 COLGALT2Q8IYK4 626 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 BPIFA3Q9BQP9 254 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 CHST7Q9NS84 486 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 USP25Q9UHP3 1055 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 ZMIZ1Q9ULJ6 1067 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 NBEAQ8NFP9 2946 aa14.15□□□□□ -0.14
SCAF1-202ENST00000595242 CNTNAP2Q9UHC6 1331 aa14.15□□□□□ -0.15
SCAF1-202ENST00000595242 SETXQ7Z333 2677 aaKnown RBP14.14□□□□□ -0.15
SCAF1-202ENST00000595242 FOXD2O60548 495 aaPredicted RBP14.14□□□□□ -0.15
SCAF1-202ENST00000595242 RPL17P18621 184 aaKnown RBP14.14□□□□□ -0.15
SCAF1-202ENST00000595242 ZNF165P49910 485 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 PRKCEQ02156 737 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 AP3B2Q13367 1082 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 PPP1R18Q6NYC8 613 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 KRBA2Q6ZNG9 492 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 MRPL10Q7Z7H8 261 aaKnown RBP14.14□□□□□ -0.15
SCAF1-202ENST00000595242 DNAJC25Q9H1X3 360 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 HEBP1Q9NRV9 189 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.14□□□□□ -0.15
SCAF1-202ENST00000595242 FNIP2Q9P278 1114 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 KCNH3Q9ULD8 1083 aa14.14□□□□□ -0.15
SCAF1-202ENST00000595242 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 SHISA7A6NL88 538 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 WDR64B1ANS9 1081 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 C1QTNF9BB2RNN3 333 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 F8W810 466 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 WNT7AO00755 349 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 C1QTNF9P0C862 333 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 DNM2P50570 870 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 ORC2Q13416 577 aaPredicted RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 ARL6IP4Q66PJ3 421 aaKnown RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 ZNF410Q86VK4 478 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 KSR1Q8IVT5 923 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 CEP57L1Q8IYX8 460 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 ITFG1Q8TB96 612 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 CHRDQ9H2X0 955 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 CCDC39Q9UFE4 941 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 NDRG2Q9UN36 371 aaKnown RBP14.13□□□□□ -0.15
SCAF1-202ENST00000595242 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
SCAF1-202ENST00000595242 DSPP15924 2871 aaKnown RBP14.12□□□□□ -0.15
SCAF1-202ENST00000595242 TM4SF5O14894 197 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 ADAMTS3O15072 1205 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 AP5Z1O43299 807 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 HRO43593 1189 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 ADCY5O95622 1261 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 CYP3A4P08684 503 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 LIMK1P53667 647 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 NLRP12P59046 1061 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
SCAF1-202ENST00000595242 GRIN1Q05586 938 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 TARBP2Q15633 366 aaKnown RBP14.12□□□□□ -0.15
SCAF1-202ENST00000595242 UGCGQ16739 394 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 USP41Q3LFD5 358 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 SARM1Q6SZW1 724 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 PIK3AP1Q6ZUJ8 805 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 KRT25Q7Z3Z0 450 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 LUZP1Q86V48 1076 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 ZNF687Q8N1G0 1237 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 MBOAT7Q96N66 472 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 GPR62Q9BZJ7 368 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 CSRNP2Q9H175 543 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 DISC1Q9NRI5 854 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 SUCLA2Q9P2R7 463 aaPredicted RBP14.12□□□□□ -0.15
SCAF1-202ENST00000595242 POLIQ9UNA4 740 aa14.12□□□□□ -0.15
SCAF1-202ENST00000595242 IGKV6-21A0A0C4DH24 114 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 ESPNB1AK53 854 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 COL4A2P08572 1712 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCAF1-202ENST00000595242 GNA11P29992 359 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 CCR3P51677 355 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 CREMQ03060 361 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 DSC1Q08554 894 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 MTERF2Q49AM1 385 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
SCAF1-202ENST00000595242 NT5DC1Q5TFE4 455 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms