RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SMTNL1A8MU46 457 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 NT5C1B-RDH14C9J2C7 533 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 FAM189A1O60320 539 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 RHOBTB3O94955 611 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 HOXD13P35453 343 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 PLCB3Q01970 1234 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 KRT17Q04695 432 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 KCNB1Q14721 858 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 BMT2Q1RMZ1 405 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 XKR4Q5GH76 650 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 MRPL38Q96DV4 380 aaKnown RBP21.33■■□□□ 1.01
LSM4-203ENST00000593829 FAN1Q9Y2M0 1017 aa21.33■■□□□ 1.01
LSM4-203ENST00000593829 GARTP22102 1010 aa21.33■■□□□ 1
LSM4-203ENST00000593829 TNFSF9P41273 254 aa21.33■■□□□ 1
LSM4-203ENST00000593829 UBE3AQ05086 875 aa21.33■■□□□ 1
LSM4-203ENST00000593829 TUSC3Q13454 348 aa21.33■■□□□ 1
LSM4-203ENST00000593829 SLC10A6Q3KNW5 377 aa21.33■■□□□ 1
LSM4-203ENST00000593829 ANO6Q4KMQ2 910 aa21.33■■□□□ 1
LSM4-203ENST00000593829 KIAA0895Q8NCT3 520 aa21.33■■□□□ 1
LSM4-203ENST00000593829 PLEKHA5Q9HAU0 1116 aa21.33■■□□□ 1
LSM4-203ENST00000593829 SMIM28A0A1B0GU29 152 aa21.32■■□□□ 1
LSM4-203ENST00000593829 SMC2O95347 1197 aa21.32■■□□□ 1
LSM4-203ENST00000593829 CXCL8P10145 99 aa21.32■■□□□ 1
LSM4-203ENST00000593829 OR1G1P47890 313 aa21.32■■□□□ 1
LSM4-203ENST00000593829 GLRA4Q5JXX5 417 aa21.32■■□□□ 1
LSM4-203ENST00000593829 ZBTB41Q5SVQ8 909 aa21.32■■□□□ 1
LSM4-203ENST00000593829 SARM1Q6SZW1 724 aa21.32■■□□□ 1
LSM4-203ENST00000593829 LUZP1Q86V48 1076 aa21.32■■□□□ 1
LSM4-203ENST00000593829 NELFCDQ8IXH7 590 aa21.32■■□□□ 1
LSM4-203ENST00000593829 POF1BQ8WVV4 589 aa21.32■■□□□ 1
LSM4-203ENST00000593829 TMEM169Q96HH4 297 aa21.32■■□□□ 1
LSM4-203ENST00000593829 PPP1R10Q96QC0 940 aaKnown RBP21.32■■□□□ 1
LSM4-203ENST00000593829 RPF1Q9H9Y2 349 aaKnown RBP21.32■■□□□ 1
LSM4-203ENST00000593829 CNTN3Q9P232 1028 aa21.32■■□□□ 1
LSM4-203ENST00000593829 PUF60Q9UHX1 559 aaKnown RBP21.32■■□□□ 1
LSM4-203ENST00000593829 CPSF3Q9UKF6 684 aaKnown RBP21.32■■□□□ 1
LSM4-203ENST00000593829 LZTS1Q9Y250 596 aa21.32■■□□□ 1
LSM4-203ENST00000593829 PAXBP1Q9Y5B6 917 aa21.32■■□□□ 1
LSM4-203ENST00000593829 NRP1O14786 923 aa21.31■■□□□ 1
LSM4-203ENST00000593829 KCNE1P15382 129 aa21.31■■□□□ 1
LSM4-203ENST00000593829 CCDC186Q7Z3E2 898 aa21.31■■□□□ 1
LSM4-203ENST00000593829 IGSF21Q96ID5 467 aa21.31■■□□□ 1
LSM4-203ENST00000593829 RMND1Q9NWS8 449 aa21.31■■□□□ 1
LSM4-203ENST00000593829 TDRD15B5MCY1 1934 aaKnown RBP21.31■■□□□ 1
LSM4-203ENST00000593829 MEFVO15553 781 aaPredicted RBP21.31■■□□□ 1
LSM4-203ENST00000593829 ACOT2P49753 483 aa21.31■■□□□ 1
LSM4-203ENST00000593829 NAB2Q15742 525 aa21.31■■□□□ 1
LSM4-203ENST00000593829 KNOP1Q1ED39 458 aaKnown RBP21.31■■□□□ 1
LSM4-203ENST00000593829 ARMCX5Q6P1M9 558 aa21.31■■□□□ 1
LSM4-203ENST00000593829 TMEM173Q86WV6 379 aaPredicted RBP21.31■■□□□ 1
LSM4-203ENST00000593829 CBWD1Q9BRT8 395 aa21.31■■□□□ 1
LSM4-203ENST00000593829 SLC38A7Q9NVC3 462 aa21.31■■□□□ 1
LSM4-203ENST00000593829 PRG3Q9Y2Y8 225 aaPredicted RBP21.31■■□□□ 1
LSM4-203ENST00000593829 TTC26A0AVF1 554 aa21.3■■□□□ 1
LSM4-203ENST00000593829 LDHAP00338 332 aaKnown RBP21.3■■□□□ 1
LSM4-203ENST00000593829 DNAJB1P25685 340 aa21.3■■□□□ 1
LSM4-203ENST00000593829 SNRPFP62306 86 aaKnown RBP21.3■■□□□ 1
LSM4-203ENST00000593829 PPP2R3AQ06190 1150 aa21.3■■□□□ 1
LSM4-203ENST00000593829 ENOX2Q16206 610 aaKnown RBP21.3■■□□□ 1
LSM4-203ENST00000593829 ZMAT2Q96NC0 199 aaKnown RBP21.3■■□□□ 1
LSM4-203ENST00000593829 GSDMAQ96QA5 445 aa21.3■■□□□ 1
LSM4-203ENST00000593829 KIAA0391O15091 583 aaKnown RBP21.29■■□□□ 1
LSM4-203ENST00000593829 TGFB1I1O43294 461 aa21.29■■□□□ 1
LSM4-203ENST00000593829 KIF20AO95235 890 aa21.29■■□□□ 1
LSM4-203ENST00000593829 POU5F1Q01860 360 aaKnown RBP21.29■■□□□ 1
LSM4-203ENST00000593829 CAMK1Q14012 370 aa21.29■■□□□ 1
LSM4-203ENST00000593829 HS2ST1Q7LGA3 356 aa21.29■■□□□ 1
LSM4-203ENST00000593829 SMARCE1Q969G3 411 aa21.29■■□□□ 1
LSM4-203ENST00000593829 COLEC11Q9BWP8 271 aa21.29■■□□□ 1
LSM4-203ENST00000593829 PCDHA5Q9Y5H7 936 aa21.29■■□□□ 1
LSM4-203ENST00000593829 CASTOR2A6NHX0 329 aa21.29■■□□□ 1
LSM4-203ENST00000593829 LACTBL1A8MY62 500 aa21.29■■□□□ 1
LSM4-203ENST00000593829 CD302Q8IX05 232 aa21.29■■□□□ 1
LSM4-203ENST00000593829 MICALL1Q8N3F8 863 aa21.29■■□□□ 1
LSM4-203ENST00000593829 MAFAQ8NHW3 353 aaPredicted RBP21.29■■□□□ 1
LSM4-203ENST00000593829 SPATA20Q8TB22 786 aa21.29■■□□□ 1
LSM4-203ENST00000593829 BCL7CQ8WUZ0 217 aaPredicted RBP21.29■■□□□ 1
LSM4-203ENST00000593829 SAAL1Q96ER3 474 aa21.29■■□□□ 1
LSM4-203ENST00000593829 FAM213AQ9BRX8 229 aa21.29■■□□□ 1
LSM4-203ENST00000593829 PCIF1Q9H4Z3 704 aa21.29■■□□□ 1
LSM4-203ENST00000593829 TLR9Q9NR96 1032 aa21.29■■□□□ 1
LSM4-203ENST00000593829 AGPAT3Q9NRZ7 376 aa21.29■■□□□ 1
LSM4-203ENST00000593829 CGNQ9P2M7 1197 aaKnown RBP21.29■■□□□ 1
LSM4-203ENST00000593829 ADRB2P07550 413 aa21.28■■□□□ 1
LSM4-203ENST00000593829 CAMK4Q16566 473 aa21.28■■□□□ 1
LSM4-203ENST00000593829 TIGD5Q53EQ6 642 aa21.28■■□□□ 1
LSM4-203ENST00000593829 CRELD2Q6UXH1 353 aaPredicted RBP21.28■■□□□ 1
LSM4-203ENST00000593829 DDX53Q86TM3 631 aaKnown RBP21.28■■□□□ 1
LSM4-203ENST00000593829 ERCC4Q92889 916 aaPredicted RBP21.28■■□□□ 1
LSM4-203ENST00000593829 FAM212AQ96EL1 285 aa21.28■■□□□ 1
LSM4-203ENST00000593829 TSPAN18Q96SJ8 248 aa21.28■■□□□ 1
LSM4-203ENST00000593829 STK39Q9UEW8 545 aa21.28■■□□□ 1
LSM4-203ENST00000593829 PLXNA4Q9HCM2 1894 aa21.28■■□□□ 1
LSM4-203ENST00000593829 EXTL3O43909 919 aa21.27■■□□□ 1
LSM4-203ENST00000593829 CSPG5O95196 566 aa21.27■■□□□ 1
LSM4-203ENST00000593829 ZNF165P49910 485 aa21.27■■□□□ 1
LSM4-203ENST00000593829 GOLGA5Q8TBA6 731 aa21.27■■□□□ 1
LSM4-203ENST00000593829 UROC1Q96N76 676 aa21.27■■□□□ 1
LSM4-203ENST00000593829 ARID3AQ99856 593 aa21.27■■□□□ 1
LSM4-203ENST00000593829 TRIM5Q9C035 493 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms