RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 UBXN2BQ14CS0 331 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 MLF2Q15773 248 aaPredicted RBP18.24■□□□□ 0.51
CCDC57-219ENST00000584717 ZC3H14Q6PJT7 736 aaKnown RBP18.24■□□□□ 0.51
CCDC57-219ENST00000584717 ERMP1Q7Z2K6 904 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 NPAS3Q8IXF0 933 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 KIAA2013Q8IYS2 634 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 C3orf58Q8NDZ4 430 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 HINFPQ9BQA5 517 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 BHMT2Q9H2M3 363 aa18.24■□□□□ 0.51
CCDC57-219ENST00000584717 KANSL1LA0AUZ9 987 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 POU2F2P09086 479 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 CCT6AP40227 531 aaKnown RBP18.23■□□□□ 0.51
CCDC57-219ENST00000584717 BRCC3P46736 316 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 RBM25P49756 843 aaKnown RBP18.23■□□□□ 0.51
CCDC57-219ENST00000584717 EFNA5P52803 228 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 UVSSAQ2YD98 709 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 HAUS3Q68CZ6 603 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 CD300LGQ6UXG3 332 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 CEP120Q8N960 986 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 KIFAP3Q92845 792 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 DDX27Q96GQ7 796 aaKnown RBP18.23■□□□□ 0.51
CCDC57-219ENST00000584717 C8orf76Q96K31 380 aa18.23■□□□□ 0.51
CCDC57-219ENST00000584717 MRPS23Q9Y3D9 190 aaKnown RBP18.23■□□□□ 0.51
CCDC57-219ENST00000584717 MTF2Q9Y483 593 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-219ENST00000584717 PATJQ8NI35 1801 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 CD72P21854 359 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 OSTNP61366 133 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 ORC2Q13416 577 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-219ENST00000584717 NBR1Q14596 966 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 UPP1Q16831 310 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 MAML2Q8IZL2 1156 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-219ENST00000584717 UROC1Q96N76 676 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 DDX23Q9BUQ8 820 aaKnown RBP18.22■□□□□ 0.51
CCDC57-219ENST00000584717 BCO2Q9BYV7 579 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 SPATA6Q9NWH7 488 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-219ENST00000584717 KCNH3Q9ULD8 1083 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 KIAA1024Q9UPX6 916 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 BACE2Q9Y5Z0 518 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 CEP250Q9BV73 2442 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 GPR179Q6PRD1 2367 aa18.22■□□□□ 0.51
CCDC57-219ENST00000584717 SMIM28A0A1B0GU29 152 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 K7ERI5 159 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 PRKCQQ04759 706 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 SOX4Q06945 474 aaPredicted RBP18.21■□□□□ 0.51
CCDC57-219ENST00000584717 SLC5A9Q2M3M2 681 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 ZNF568Q3ZCX4 644 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 ANKS3Q6ZW76 656 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 APBB1IPQ7Z5R6 666 aaPredicted RBP18.21■□□□□ 0.51
CCDC57-219ENST00000584717 RMDN1Q96DB5 314 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 MCRS1Q96EZ8 462 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 CDT1Q9H211 546 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 FOXP1Q9H334 677 aaPredicted RBP18.21■□□□□ 0.51
CCDC57-219ENST00000584717 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
CCDC57-219ENST00000584717 TNFSF13BQ9Y275 285 aa18.21■□□□□ 0.51
CCDC57-219ENST00000584717 FAM170BA6NMN3 283 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 LAMTOR5O43504 91 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 TRAPPC3O43617 180 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 RHOP08100 348 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 CEBPBP17676 345 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 MUTP22033 750 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 GRM5P41594 1212 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 FXR2P51116 673 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC57-219ENST00000584717 YARSP54577 528 aaKnown RBP18.2■□□□□ 0.5
CCDC57-219ENST00000584717 PEX3P56589 373 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 PFKPQ01813 784 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 ROR1Q01973 937 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 DCLK2Q8N568 766 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 CCDC94Q9BW85 323 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-219ENST00000584717 PLA2G2FQ9BZM2 168 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 PHLPP2Q6ZVD8 1323 aa18.2■□□□□ 0.5
CCDC57-219ENST00000584717 ARPP19P56211 112 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 GNL2Q13823 731 aaKnown RBP18.19■□□□□ 0.5
CCDC57-219ENST00000584717 VARS2Q5ST30 1063 aaKnown RBP18.19■□□□□ 0.5
CCDC57-219ENST00000584717 POTEHQ6S545 545 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 TPRG1Q6ZUI0 275 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 RTL10Q7L3V2 364 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 C4orf32Q8N8J7 132 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 SNX29Q8TEQ0 813 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 RUBCNQ92622 972 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 ACO2Q99798 780 aaKnown RBP18.19■□□□□ 0.5
CCDC57-219ENST00000584717 LTB4R2Q9NPC1 389 aa18.19■□□□□ 0.5
CCDC57-219ENST00000584717 TOPORSQ9NS56 1045 aaPredicted RBP18.19■□□□□ 0.5
CCDC57-219ENST00000584717 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 PODXLO00592 558 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 PRRG1O14668 218 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 KINO60870 393 aaKnown RBP18.18■□□□□ 0.5
CCDC57-219ENST00000584717 ECI2O75521 394 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 LRG1P02750 347 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 TARSP26639 723 aaKnown RBP18.18■□□□□ 0.5
CCDC57-219ENST00000584717 ELF1P32519 619 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 NPTX2P47972 431 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 CSTF1Q05048 431 aaKnown RBP18.18■□□□□ 0.5
CCDC57-219ENST00000584717 XKR4Q5GH76 650 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 ALKAL1Q6UXT8 129 aa18.18■□□□□ 0.5
CCDC57-219ENST00000584717 TAS1R3Q7RTX0 852 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms