RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CD300LGQ6UXG3 332 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
RFFL-209ENST00000581265 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 FGF13Q92913 245 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 FGF14Q92915 247 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 SHDQ96IW2 340 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 UROC1Q96N76 676 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 KIFC3Q9BVG8 833 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 POLD4Q9HCU8 107 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 DLGAP2Q9P1A6 1054 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 MTRRQ9UBK8 725 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 KIAA1024Q9UPX6 916 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 BACE2Q9Y5Z0 518 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
RFFL-209ENST00000581265 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 PRR5-ARHGAP8B1AHC4 643 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 SP9P0CG40 484 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 U2AF2P26368 475 aaKnown RBP eCLIP11.65□□□□□ -0.541e-6■■□□□ 13.4
RFFL-209ENST00000581265 CLCNKBP51801 687 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 GPC5P78333 572 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 HMGN5P82970 282 aaKnown RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 ARHGAP8P85298 464 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 COL9A2Q14055 689 aaPredicted RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 XKR4Q5GH76 650 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 RSPO2Q6UXX9 243 aaPredicted RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 ANKS3Q6ZW76 656 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 MTSS1LQ765P7 747 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 SLC7A14Q8TBB6 771 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 ZSCAN31Q96LW9 406 aaPredicted RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 ACO2Q99798 780 aaKnown RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 PTPRHQ9HD43 1115 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 DDX19AQ9NUU7 478 aaKnown RBP11.65□□□□□ -0.54
RFFL-209ENST00000581265 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 CACNA1IQ9P0X4 2223 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 DMDP11532 3685 aa11.65□□□□□ -0.54
RFFL-209ENST00000581265 EPG5Q9HCE0 2579 aa11.65□□□□□ -0.55
RFFL-209ENST00000581265 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 CCL16O15467 120 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 GRM5P41594 1212 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 NPTX2P47972 431 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 PTGDRQ13258 359 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 GLRA4Q5JXX5 417 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 C1orf210Q8IVY1 113 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 DAW1Q8N136 415 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 ST13P5Q8NFI4 369 aaPredicted RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 PJA1Q8NG27 643 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 ZNF461Q8TAF7 563 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 ITFG1Q8TB96 612 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 DDX23Q9BUQ8 820 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 RAB34Q9BZG1 259 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 TOPORSQ9NS56 1045 aaPredicted RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 DNMT3BQ9UBC3 853 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 POLIQ9UNA4 740 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 DNM3Q9UQ16 869 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 RBM19Q9Y4C8 960 aaKnown RBP11.64□□□□□ -0.55
RFFL-209ENST00000581265 CDY1Q9Y6F8 540 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
RFFL-209ENST00000581265 PHLPP2Q6ZVD8 1323 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 ZNF292O60281 2723 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 KANSL1LA0AUZ9 987 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 LAD1O00515 517 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 ABLIM3O94929 683 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 GLULP15104 373 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 PROZP22891 400 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 TKTP29401 623 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 YARSP54577 528 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 PEX3P56589 373 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 LMNB2Q03252 620 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 DMWDQ09019 674 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 SNW1Q13573 536 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 NBR1Q14596 966 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 PABPC1LQ4VXU2 614 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 SLC44A4Q53GD3 710 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 SLC8B1Q6J4K2 584 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 CEP120Q8N960 986 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 FAM184AQ8NB25 1140 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 SNX29Q8TEQ0 813 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 ZMAT2Q96NC0 199 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 RTKNQ9BST9 563 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 MRPL4Q9BYD3 311 aaKnown RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 OSBPL6Q9BZF3 934 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms