RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 FBXO47Q5MNV8 452 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 SFMBT2Q5VUG0 894 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 CPB2Q96IY4 423 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 PPP1R13BQ96KQ4 1090 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 OSMRQ99650 979 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 CRACR2AQ9BSW2 395 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 PPP2R2CQ9Y2T4 447 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.9□□□□□ -1.3
RTTN-204ENST00000579986 CDY2AQ9Y6F7 541 aa6.9□□□□□ -1.3
RTTN-204ENST00000579986 USP27XA6NNY8 438 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 LRRN2O75325 713 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 CCL5P13501 91 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 FERP16591 822 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 CYP3A5P20815 502 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 ATICP31939 592 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 ARHGAP25P42331 645 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 MTF1Q14872 753 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 RRAGAQ7L523 313 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 CREBRFQ8IUR6 639 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 BCO2Q9BYV7 579 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 APOBEC3GQ9HC16 384 aaKnown RBP6.9□□□□□ -1.31
RTTN-204ENST00000579986 SIX4Q9UIU6 781 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 NOCTQ9UK39 431 aaKnown RBP6.9□□□□□ -1.31
RTTN-204ENST00000579986 DNAJC12Q9UKB3 198 aa6.9□□□□□ -1.31
RTTN-204ENST00000579986 EPN1Q9Y6I3 576 aaPredicted RBP6.9□□□□□ -1.31
RTTN-204ENST00000579986 TSC2P49815 1807 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 ANO9A1A5B4 782 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 LACTBL1A8MY62 500 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 ERLIN2O94905 339 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 HLA-DRAP01903 254 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 STAT1P42224 750 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 LPIN1Q14693 890 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 GPNMBQ14956 572 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 NAB2Q15742 525 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 DUOXA2Q1HG44 320 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 GJB7Q6PEY0 223 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 TRAPPC11Q7Z392 1133 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CTU1Q7Z7A3 348 aaKnown RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 CRIPAKQ8N1N5 446 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CEP120Q8N960 986 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CAGE1Q8TC20 777 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 SH3TC2Q8TF17 1288 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CPLX3Q8WVH0 158 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 TOX2Q96NM4 488 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 EIF2AQ9BY44 585 aaKnown RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 FAM49AQ9H0Q0 323 aaPredicted RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 RPF1Q9H9Y2 349 aaKnown RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 COL4A4P53420 1690 aaPredicted RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 GOLGA6L9A6NEM1 432 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 NRDCO43847 1150 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CXCL8P10145 99 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CKBP12277 381 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 MSNP26038 577 aaKnown RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 FAM189BP81408 668 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 DRAP1Q14919 205 aaPredicted RBP6.89□□□□□ -1.31
RTTN-204ENST00000579986 SLC9C1Q4G0N8 1177 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 C10orf76Q5T2E6 689 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 SCARA3Q6AZY7 606 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 ZBTB33Q86T24 672 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 CCDC127Q96BQ5 260 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 GLT1D1Q96MS3 346 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 ACAP3Q96P50 834 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 ITGA11Q9UKX5 1188 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 COL4A6Q14031 1691 aa6.89□□□□□ -1.31
RTTN-204ENST00000579986 PITPNM1O00562 1244 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 GPR182O15218 404 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 ZSCAN12O43309 604 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 CSDE1O75534 798 aaKnown RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 CST3P01034 146 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 PLEKP08567 350 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 FAM163BP0C2L3 166 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 TBXAS1P24557 533 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 ASPAP45381 313 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 MFAP3P55082 362 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 NCBP1Q09161 790 aaKnown RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 MBTPS1Q14703 1052 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 SLC18A3Q16572 532 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 SGSM1Q2NKQ1 1148 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 JADE1Q6IE81 842 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 CATSPER4Q7RTX7 472 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 ZNF571Q7Z3V5 609 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 ZNF668Q96K58 619 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 FNBP1Q96RU3 617 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 ADPGKQ9BRR6 497 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 BEGAINQ9BUH8 593 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 TRMT13Q9NUP7 481 aaKnown RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 INTUQ9ULD6 942 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 FOXN3O00409 490 aaPredicted RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 PES1O00541 588 aaKnown RBP6.88□□□□□ -1.31
RTTN-204ENST00000579986 CAPN15O75808 1086 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 NPTXRO95502 500 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 NFICP08651 508 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 CCDC175P0C221 793 aa6.88□□□□□ -1.31
RTTN-204ENST00000579986 FGFR4P22455 802 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms