RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ZSWIM4Q9H7M6 989 aa18.03■□□□□ 0.48
CTDNEP1-211ENST00000575783 MTRRQ9UBK8 725 aa18.03■□□□□ 0.48
CTDNEP1-211ENST00000575783 FAM208BQ5VWN6 2430 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 PTGESO14684 152 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 AXIN1O15169 862 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 PROS1P07225 676 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 IFNAR1P17181 557 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 IGFBP6P24592 240 aaPredicted RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 MAP4K3Q8IVH8 894 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 TPH2Q8IWU9 490 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 SPEM1Q8N4L4 309 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 C12orf50Q8NA57 414 aaPredicted RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 AVENQ9NQS1 362 aaPredicted RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 RBM12Q9NTZ6 932 aaKnown RBP18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 SNTG2Q9NY99 539 aa18.02■□□□□ 0.48
CTDNEP1-211ENST00000575783 CNOT1A5YKK6 2376 aaKnown RBP18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 PRRG1O14668 218 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 PSMC3P17980 439 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 FGFR3P22607 806 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ELF1P32519 619 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 VIPR2P41587 438 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 VITQ6UXI7 678 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ARRDC1-AS1Q9H2J1 176 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 RXFP3Q9NSD7 469 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZMYM2Q9UBW7 1377 aa18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 ANKRD11Q6UB99 2663 aaPredicted RBP18.01■□□□□ 0.47
CTDNEP1-211ENST00000575783 M0R2N6 131 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZNF197O14709 1029 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 TM4SF5O14894 197 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZNF263O14978 683 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 B3GAT3O94766 335 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 GLRA2P23416 452 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 TKTP29401 623 aaKnown RBP18■□□□□ 0.47
CTDNEP1-211ENST00000575783 ARL2P36404 184 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 LIMK1P53667 647 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 SPIRE1Q08AE8 756 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 TMEM132AQ24JP5 1023 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 PRSS36Q5K4E3 855 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 SMARCD2Q92925 531 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 F5P12259 2224 aa18■□□□□ 0.47
CTDNEP1-211ENST00000575783 I3L4J1 428 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 K7ESF4 209 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 HOXC13P31276 330 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 CCR2P41597 374 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 ARPP19P56211 112 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 PTGDRQ13258 359 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 LRRC32Q14392 662 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 ACAP1Q15027 740 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 NAB2Q15742 525 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 STPG1Q5TH74 334 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 PDZD4Q76G19 769 aaPredicted RBP17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 NFKBIZQ9BYH8 718 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZMIZ1Q9ULJ6 1067 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 BACE2Q9Y5Z0 518 aa17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 TDRD15B5MCY1 1934 aaKnown RBP17.99■□□□□ 0.47
CTDNEP1-211ENST00000575783 ARHGEF37A1IGU5 675 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 WDR27A2RRH5 827 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 LRRIQ4A6NIV6 560 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 C1QTNF9BB2RNN3 333 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 TBX3O15119 743 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 CCNT1O60563 726 aaKnown RBP17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 RECQL4O94761 1208 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 SLITRK3O94933 977 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 KCNK5O95279 499 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 C1QTNF9P0C862 333 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 CYP4A22Q5TCH4 519 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 Q6ZS52 159 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 MAEAQ7L5Y9 396 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 KRT25Q7Z3Z0 450 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 NOSTRINQ8IVI9 506 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZNF461Q8TAF7 563 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 CSGALNACT1Q8TDX6 532 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 HAS1Q92839 578 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 POLR3FQ9H1D9 316 aaPredicted RBP17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 CYP4F11Q9HBI6 524 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 C2orf42Q9NWW7 574 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 NID2Q14112 1375 aa17.98■□□□□ 0.47
CTDNEP1-211ENST00000575783 LAMA1P25391 3075 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 DGAT1O75907 488 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 ZNF806P0C7X5 589 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 GJA1P17302 382 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 SOX9P48436 509 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 CLCNKBP51801 687 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 KPNA1P52294 538 aaPredicted RBP17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 ROR1Q01973 937 aa17.97■□□□□ 0.47
CTDNEP1-211ENST00000575783 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms