RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 IFT81Q8WYA0 676 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 MBOAT7Q96N66 472 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 ARHGAP39Q9C0H5 1083 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 CAPN11Q9UMQ6 739 aa10.8□□□□□ -0.68
SMG6-213ENST00000573166 E7EVH7 732 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 STK10O94804 968 aaKnown RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 IFNB1P01574 187 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PCSK1P29120 753 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 RAB27AP51159 221 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 LONRF2Q1L5Z9 754 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TRAPPC11Q7Z392 1133 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 ADAT2Q7Z6V5 191 aaKnown RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 BCAS3Q9H6U6 928 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 FAM204AQ9H8W3 233 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 ANKRD63C9JTQ0 380 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PTENP60484 403 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 KAZNQ674X7 775 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TOGARAM2Q6ZUX3 1019 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 SV2AQ7L0J3 742 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 COLEC11Q9BWP8 271 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 NT5C1AQ9BXI3 368 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 FAM49BQ9NUQ9 324 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 MAFBQ9Y5Q3 323 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 MYH7P12883 1935 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 C2CD2LO14523 706 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 MDM2Q00987 491 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 SP2Q02086 613 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 KRT17Q04695 432 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 GFPT1Q06210 699 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 CGRRF1Q99675 332 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PTPN18Q99952 460 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 CARD6Q9BX69 1037 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TRIM31Q9BZY9 425 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PIDD1Q9HB75 910 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 SLC12A6Q9UHW9 1150 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 HYOU1Q9Y4L1 999 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PTCH2Q9Y6C5 1203 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 SCINQ9Y6U3 715 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TCHHQ07283 1943 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 KLRC4O43908 158 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 FTLP02792 175 aaPredicted RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 VAV2P52735 878 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PSMC1P62191 440 aaKnown RBP10.79□□□□□ -0.68
SMG6-213ENST00000573166 ARHGAP1Q07960 439 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 VEPH1Q14D04 833 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 AMHR2Q16671 573 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 C8orf74Q6P047 294 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 ELMOD1Q8N336 334 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 TAS1R2Q8TE23 839 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 PPP2R3CQ969Q6 453 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 ZBTB10Q96DT7 871 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 MROH7Q68CQ1 1323 aa10.79□□□□□ -0.68
SMG6-213ENST00000573166 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 EVI5O60447 810 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 CALB1P05937 261 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 KLK7P49862 253 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 FXR1P51114 621 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMG6-213ENST00000573166 GTF2BQ00403 316 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 TUBB2AQ13885 445 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 C17orf99Q6UX52 265 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 SLC35F6Q8N357 371 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 HASPINQ8TF76 798 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 MAIP1Q8WWC4 291 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ASIC3Q9UHC3 531 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ANAPC7Q9UJX3 599 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 HES2Q9Y543 173 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 MORC2Q9Y6X9 1032 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 NAV1Q8NEY1 1877 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 SMIM35A0A1B0GVV1 85 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 TBKBP1A7MCY6 615 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ENC1O14682 589 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 SNAI1O95863 264 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 CD52P31358 61 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 GNL1P36915 607 aaPredicted RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 IKBKEQ14164 716 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 GJB7Q6PEY0 223 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 CTU1Q7Z7A3 348 aaKnown RBP10.78□□□□□ -0.68
SMG6-213ENST00000573166 RHOT2Q8IXI1 618 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ERGIC2Q96RQ1 377 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 GAD1Q99259 594 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 ST3GAL5Q9UNP4 418 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 IKBKGQ9Y6K9 419 aa10.78□□□□□ -0.68
SMG6-213ENST00000573166 TYW5A2RUC4 315 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms