RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 ISM2Q6H9L7 571 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 ARMCX5Q6P1M9 558 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.33
TRIM25-205ENST00000572021 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 RSPH1Q8WYR4 309 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 FAM84AQ96KN4 292 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 TIGD1Q96MW7 591 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 RPF1Q9H9Y2 349 aaKnown RBP12.96□□□□□ -0.33
TRIM25-205ENST00000572021 MARCH5Q9NX47 278 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 TUBGCP4Q9UGJ1 667 aa12.96□□□□□ -0.33
TRIM25-205ENST00000572021 CPSF3Q9UKF6 684 aaKnown RBP12.96□□□□□ -0.33
TRIM25-205ENST00000572021 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 RHOBTB3O94955 611 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 CA8P35219 290 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PPM1AP35813 382 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 CYP2J2P51589 502 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 WNT7BP56706 349 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PLCB3Q01970 1234 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 KRT17Q04695 432 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PSMD2Q13200 908 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 CAMK4Q16566 473 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 TCEAL5Q5H9L2 206 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 ADGRD2Q7Z7M1 963 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 MICAL1Q8TDZ2 1067 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
TRIM25-205ENST00000572021 CCDC34Q96HJ3 373 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 B3GALT6Q96L58 329 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 TLR9Q9NR96 1032 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 AGPAT3Q9NRZ7 376 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 XIRP2A4UGR9 3374 aa12.95□□□□□ -0.34
TRIM25-205ENST00000572021 KIF4AO95239 1232 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 NFICP08651 508 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 KCNE1P15382 129 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 POU3F3P20264 500 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 GARTP22102 1010 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.343e-13■■■■■ 53.6
TRIM25-205ENST00000572021 CLCNKBP51801 687 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 RBM23Q86U06 439 aaKnown RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 TRIM44Q96DX7 344 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 TCF25Q9BQ70 676 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 ENTPD7Q9NQZ7 604 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 UBE4BO95155 1302 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 BIN1O00499 593 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 CAVIN2O95810 425 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 TYRO3Q06418 890 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 KCNB1Q14721 858 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 TMC7Q7Z402 723 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 DDX53Q86TM3 631 aaKnown RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 C3orf58Q8NDZ4 430 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 COLEC11Q9BWP8 271 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
TRIM25-205ENST00000572021 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
TRIM25-205ENST00000572021 I3L4J1 428 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 C2CD2LO14523 706 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 PER2O15055 1255 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 EXTL3O43909 919 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 TADA2AO75478 443 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 SMC2O95347 1197 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 UBE3AQ05086 875 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 KYAT1Q16773 422 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 KCTD10Q9H3F6 313 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 NSUN3Q9H649 340 aaKnown RBP12.93□□□□□ -0.34
TRIM25-205ENST00000572021 PLEKHA5Q9HAU0 1116 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-205ENST00000572021 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
TRIM25-205ENST00000572021 MAN1B1Q9UKM7 699 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 ADAM28Q9UKQ2 775 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
TRIM25-205ENST00000572021 PODXLO00592 558 aa12.92□□□□□ -0.34
TRIM25-205ENST00000572021 FSCN2O14926 492 aa12.92□□□□□ -0.34
TRIM25-205ENST00000572021 SLC34A2O95436 690 aa12.92□□□□□ -0.34
TRIM25-205ENST00000572021 CXCL14O95715 111 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms