RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.5
COMMD4-224ENST00000568877 NFICP08651 508 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 LAG3P18627 525 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 HABP4Q5JVS0 413 aaKnown RBP18.16■□□□□ 0.5
COMMD4-224ENST00000568877 C11orf57Q6ZUT1 292 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-224ENST00000568877 COLGALT2Q8IYK4 626 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 C18orf25Q96B23 403 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-224ENST00000568877 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 CEP63Q96MT8 703 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 FUCA2Q9BTY2 467 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 AAASQ9NRG9 546 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 DNAJB4Q9UDY4 337 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 RWDD3Q9Y3V2 267 aa18.16■□□□□ 0.5
COMMD4-224ENST00000568877 SLC16A3O15427 465 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 XPOTO43592 962 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 ALDH2P05091 517 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 GALTP07902 379 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 EPB41P11171 864 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 BMPR1AP36894 532 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 ALDH7A1P49419 539 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 BCAR1P56945 870 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 SOX4Q06945 474 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 KCNT2Q6UVM3 1135 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 NT5DC4Q86YG4 428 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 EFCAB13Q8IY85 973 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 SAMD11Q96NU1 681 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 TGS1Q96RS0 853 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 FNBP1Q96RU3 617 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 SRRTQ9BXP5 876 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 DNAJC25Q9H1X3 360 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-224ENST00000568877 LAMA3Q16787 3333 aa18.15■□□□□ 0.5
COMMD4-224ENST00000568877 GBF1Q92538 1859 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 CASTOR2A6NHX0 329 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 FGFR1OPO95684 399 aaKnown RBP18.14■□□□□ 0.49
COMMD4-224ENST00000568877 CYP3A5P20815 502 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 OR1G1P47890 313 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 SLC11A1P49279 550 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 ERVK-21P61565 698 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 ANO6Q4KMQ2 910 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 SPATA1Q5VX52 437 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 INTS8Q75QN2 995 aaKnown RBP18.14■□□□□ 0.49
COMMD4-224ENST00000568877 BEST2Q8NFU1 509 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 PARD3BQ8TEW8 1205 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-224ENST00000568877 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 FAN1Q9Y2M0 1017 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 PCDHB12Q9Y5F1 795 aa18.14■□□□□ 0.49
COMMD4-224ENST00000568877 CARNS1A5YM72 827 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 NRP1O14786 923 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 GNA14O95837 355 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 DLATP10515 647 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 KRT13P13646 458 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 CTNNB1P35222 781 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 PBX3P40426 434 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 VAMP7P51809 220 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 TFAMQ00059 246 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 ENPEPQ07075 957 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 TPD52L1Q16890 204 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 EPC2Q52LR7 807 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 SPRED2Q7Z698 418 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 USP37Q86T82 979 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 WDR49Q8IV35 697 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 ENOX1Q8TC92 643 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 PLEKHO2Q8TD55 490 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 TMC2Q8TDI7 906 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 BORCS6Q96GS4 357 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 LRCH3Q96II8 777 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 UROC1Q96N76 676 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 POP1Q99575 1024 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 CGRRF1Q99675 332 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 PLVAPQ9BX97 442 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 NAT10Q9H0A0 1025 aaKnown RBP18.13■□□□□ 0.49
COMMD4-224ENST00000568877 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 INTS13Q9NVM9 706 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 CACNG4Q9UBN1 327 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 MTUS1Q9ULD2 1270 aa18.13■□□□□ 0.49
COMMD4-224ENST00000568877 RALGAPA2Q2PPJ7 1873 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 CITO14578 2027 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 TMEM265A0A087WTH1 108 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 NT5C1B-RDH14C9J2C7 533 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 C5orf67F2Z3F1 127 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 RB1P06400 928 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 TNNI1P19237 187 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 CLCNKBP51801 687 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 GUCY2FP51841 1108 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 MCCD1P59942 119 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-224ENST00000568877 CLDN10P78369 228 aa18.12■□□□□ 0.49
COMMD4-224ENST00000568877 BFSP1Q12934 665 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms