RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 AKAP5P24588 427 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 CDC27P30260 824 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 OR1D2P34982 312 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 CCT2P78371 535 aaKnown RBP17.66■□□□□ 0.42
RNF40-205ENST00000563909 RAB33AQ14088 237 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 PLA2G2CQ5R387 149 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 CACNA2D4Q7Z3S7 1137 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 WDR5BQ86VZ2 330 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 TMEM143Q96AN5 459 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 CPB2Q96IY4 423 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
RNF40-205ENST00000563909 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 LIMCH1Q9UPQ0 1083 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 TDRD15B5MCY1 1934 aaKnown RBP17.66■□□□□ 0.42
RNF40-205ENST00000563909 IGSF10Q6WRI0 2623 aa17.66■□□□□ 0.42
RNF40-205ENST00000563909 ESYT2A0FGR8 921 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 NRG2O14511 850 aaPredicted RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 TSPAN1O60635 241 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 ZIC2O95409 532 aaPredicted RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 PTPN2P17706 415 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 PSMC3P17980 439 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 GRIK3Q13003 919 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 Q6ZS52 159 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 KBTBD6Q86V97 674 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 HACE1Q8IYU2 909 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 RDM1Q8NG50 284 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 PSPC1Q8WXF1 523 aaKnown RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 SLC7A3Q8WY07 619 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 SCNM1Q9BWG6 230 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 CSRNP2Q9H175 543 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
RNF40-205ENST00000563909 KLK14Q9P0G3 267 aa17.65■□□□□ 0.42
RNF40-205ENST00000563909 PFKFB2O60825 505 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 HOXA6P31267 233 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 MCM2P49736 904 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 STK3Q13188 491 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 TCEAL6Q6IPX3 200 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 PDXDC1Q6P996 788 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
RNF40-205ENST00000563909 VITQ6UXI7 678 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 RTL10Q7L3V2 364 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 RNF149Q8NC42 400 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 CCDC12Q8WUD4 166 aaPredicted RBP17.64■□□□□ 0.41
RNF40-205ENST00000563909 GAB3Q8WWW8 586 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 TCEAL3Q969E4 200 aa17.64■□□□□ 0.41
RNF40-205ENST00000563909 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
RNF40-205ENST00000563909 AVENQ9NQS1 362 aaPredicted RBP17.64■□□□□ 0.41
RNF40-205ENST00000563909 FREM2Q5SZK8 3169 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 CPLX1O14810 134 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 ZNF263O14978 683 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 RPP40O75818 363 aaKnown RBP17.63■□□□□ 0.41
RNF40-205ENST00000563909 PSMD10O75832 226 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 KIF4AO95239 1232 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 GNA11P29992 359 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 AXLP30530 894 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 MPLP40238 635 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 NPEPPSP55786 919 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 SH3PXD2AQ5TCZ1 1133 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
RNF40-205ENST00000563909 TCEAL4Q96EI5 215 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 KIF12Q96FN5 646 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 ASB16Q96NS5 453 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 VPS45Q9NRW7 570 aa17.63■□□□□ 0.41
RNF40-205ENST00000563909 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 COL4A2P08572 1712 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 CASTOR2A6NHX0 329 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 VIPR2P41587 438 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 SCRN1Q12765 414 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 ME3Q16798 604 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 PRSS36Q5K4E3 855 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 CSGALNACT1Q8TDX6 532 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 SMARCD2Q92925 531 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 ZSWIM3Q96MP5 696 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 CORO1BQ9BR76 489 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 EDEM2Q9BV94 578 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
RNF40-205ENST00000563909 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
RNF40-205ENST00000563909 PARP2Q9UGN5 583 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 PCDHGA5Q9Y5G8 931 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 CDY1Q9Y6F8 540 aa17.62■□□□□ 0.41
RNF40-205ENST00000563909 EDIL3O43854 480 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 CDKL5O76039 1030 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 IFNAR1P17181 557 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 SOX9P48436 509 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 PXNP49023 591 aaPredicted RBP17.61■□□□□ 0.41
RNF40-205ENST00000563909 MLLT6P55198 1093 aaPredicted RBP17.61■□□□□ 0.41
RNF40-205ENST00000563909 PSMC5P62195 406 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 TUSC3Q13454 348 aa17.61■□□□□ 0.41
RNF40-205ENST00000563909 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.41
RNF40-205ENST00000563909 WDR44Q5JSH3 913 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms