RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 FAM86B1E9PN63 330 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 VIL1P09327 827 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 FAM86B2P0C5J1 330 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 RASSF2P50749 326 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 P3H1Q32P28 736 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 NT5DC3Q86UY8 548 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CCDC25Q86WR0 208 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 GMLQ99445 158 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 FGFBP2Q9BYJ0 223 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 NT5C3AQ9H0P0 336 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 FBXO28Q9NVF7 368 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 EYA4O95677 639 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CFBP00751 764 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CCDC166P0CW27 439 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 BRAFP15056 766 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 PABPC4Q13310 644 aaKnown RBP eCLIP14.93□□□□□ -0.029e-6■■■■□ 24.7
GTF3C1-203ENST00000562609 DGKZQ13574 1117 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 DSTYKQ6XUX3 929 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 LRRC55Q6ZSA7 311 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 RNF168Q8IYW5 571 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 RTKN2Q8IZC4 609 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 GRAMD1AQ96CP6 724 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CENPKQ9BS16 269 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 ZHX3Q9H4I2 956 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 GRHL1Q9NZI5 618 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 LARSQ9P2J5 1176 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 ARFGEF1Q9Y6D6 1849 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 MAPK13O15264 365 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 MAP3K7O43318 606 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 SLC34A1Q06495 639 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 CXCL9Q07325 125 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 SH2D4BQ5SQS7 431 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 ZNF571Q7Z3V5 609 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 GMCL1P1Q8NEA9 526 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 DYDC2Q96IM9 177 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 MAGEB18Q96M61 343 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
GTF3C1-203ENST00000562609 PFASO15067 1338 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 FAM187AA6NFU0 413 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 TBX10O75333 385 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 KRT13P13646 458 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 TAC1P20366 129 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 RPL21P46778 160 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 YARSP54577 528 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 CYP4A11Q02928 519 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ALKBH5Q6P6C2 394 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 HS2ST1Q7LGA3 356 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 KBTBD2Q8IY47 623 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 GMCL1Q96IK5 515 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ZNF184Q99676 751 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 MAGEF1Q9HAY2 307 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 HSFX1Q9UBD0 423 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 RPL26L1Q9UNX3 145 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 MED24O75448 989 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ASLP04424 464 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 FOXN2P32314 431 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 NEK3P51956 506 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 STAT2P52630 851 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 PSMC6P62333 389 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 MAPK7Q13164 816 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ORC2Q13416 577 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 GSTA3Q16772 222 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 WDR72Q3MJ13 1102 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 OLFML2BQ68BL8 750 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 STKLD1Q8NE28 680 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 HES6Q96HZ4 224 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 STK17AQ9UEE5 414 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ARMCX3Q9UH62 379 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 NAGPAQ9UK23 515 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 ZBTB21Q9ULJ3 1066 aa14.92□□□□□ -0.02
GTF3C1-203ENST00000562609 PCNTO95613 3336 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 A6NJR5 290 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ITGA2BP08514 1039 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 BAG6P46379 1132 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 AP1B1Q10567 949 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 CBX3Q13185 183 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 UNC13DQ70J99 1090 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 LENG1Q96BZ8 264 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ROPN1BQ9BZX4 212 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ROPN1Q9HAT0 212 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 RASAL2Q9UJF2 1139 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 PASKQ96RG2 1323 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ACSL3O95573 720 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms