RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 EPC1Q9H2F5 836 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 WDCPQ9H6R7 721 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 DDX21Q9NR30 783 aaKnown RBP eCLIP4.86□□□□□ -1.63
USP8-211ENST00000560527 LMBRD1Q9NUN5 540 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 GNL3LQ9NVN8 582 aaKnown RBP4.86□□□□□ -1.63
USP8-211ENST00000560527 DDX20Q9UHI6 824 aaKnown RBP4.86□□□□□ -1.63
USP8-211ENST00000560527 L1RE1Q9UN81 338 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 SH3BP1Q9Y3L3 701 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 NR2E3Q9Y5X4 410 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 ACTL7AQ9Y615 435 aa4.86□□□□□ -1.63
USP8-211ENST00000560527 A0A0G2JLL6 359 aaPredicted RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 NT5C1B-RDH14C9J2C7 533 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 WNT10BO00744 389 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 RAP2AP10114 183 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 MTHFD1P11586 935 aaKnown RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 ALAS1P13196 640 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 TRIM27P14373 513 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 TYRP14679 529 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 COMTP21964 271 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 MGAT1P26572 445 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 MSX2P35548 267 aaPredicted RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 CACNB3P54284 484 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 HHEXQ03014 270 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 CREMQ03060 361 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 SNAPC2Q13487 334 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 FAM214AQ32MH5 1076 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 PABPC1LQ4VXU2 614 aaKnown RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 SLC4A10Q6U841 1118 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 HTR3DQ70Z44 454 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 DAAM2Q86T65 1068 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 D2HGDHQ8N465 521 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 TTC9BQ8N6N2 239 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 DCBLD1Q8N8Z6 715 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 IL17RDQ8NFM7 739 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 OR52N2Q8NGI0 321 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 ZFP28Q8NHY6 868 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 PPP1R35Q8TAP8 253 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 STON2Q8WXE9 905 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 TMEM176AQ96HP8 235 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 SARGQ9BW04 601 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
USP8-211ENST00000560527 ARNT2Q9HBZ2 717 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 PNPOQ9NVS9 261 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 HDAC5Q9UQL6 1122 aa4.85□□□□□ -1.63
USP8-211ENST00000560527 CAPN8A6NHC0 703 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 LRRC14BA6NHZ5 514 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 PRR5-ARHGAP8B1AHC4 643 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 TPP1O14773 563 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 CYP27B1O15528 508 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 AMHP03971 560 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 MYL1P05976 194 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 PHKG2P15735 406 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 RHCEP18577 417 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 ZNF280AP59817 542 aaPredicted RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 RAB1AP62820 205 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 FAM193AP78312 1265 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 RHDQ02161 417 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 GALEQ14376 348 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 HS1BP3Q53T59 392 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 CCDC157Q569K6 752 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 NAIF1Q69YI7 327 aaPredicted RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 MAMDC4Q6UXC1 1216 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 NPNTQ6UXI9 565 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 LIMS2Q7Z4I7 341 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 PRRT2Q7Z6L0 340 aaPredicted RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 SLC35B2Q8TB61 432 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 EDAQ92838 391 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 CPPED1Q9BRF8 314 aaPredicted RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 NDC1Q9BTX1 674 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 B3GNT5Q9BYG0 378 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 RLIMQ9NVW2 624 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 FEZ2Q9UHY8 353 aaPredicted RBP4.84□□□□□ -1.63
USP8-211ENST00000560527 PCDHA3Q9Y5H8 950 aa4.84□□□□□ -1.63
USP8-211ENST00000560527 CCDC194A0A1B0GVG4 234 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 A6NNZ2 444 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 F2RL2O00254 374 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 FRS3O43559 492 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 ZNF623O75123 536 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 POMCP01189 267 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 CD1AP06126 327 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 PRDX5P30044 214 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 FGL2Q14314 439 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 PLS1Q14651 629 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 VPS72Q15906 364 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 FLYWCH1Q4VC44 716 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 EMC10Q5UCC4 262 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 ANKS6Q68DC2 871 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 EFCAB12Q6NXP0 572 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
USP8-211ENST00000560527 Q6ZSN1 163 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 MAEAQ7L5Y9 396 aa4.83□□□□□ -1.64
USP8-211ENST00000560527 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms