RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 PRMT7Q9NVM4 692 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 SNTG2Q9NY99 539 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 CACNA1GO43497 2377 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 N4BP3O15049 544 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 SLITRK3O94933 977 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 XBP1P17861 261 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 HSPA4P34932 840 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 GRM2Q14416 872 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 MAMSTRQ6ZN01 415 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 ANKS3Q6ZW76 656 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 AVENQ9NQS1 362 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 SEMA4GQ9NTN9 838 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 MTRRQ9UBK8 725 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 KCNJ14Q9UNX9 436 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 F5P12259 2224 aa19.69■□□□□ 0.74
TSPAN3-208ENST00000560514 PRRG1O14668 218 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 PTGESO14684 152 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 ZNF197O14709 1029 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 TRAPPC3O43617 180 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 FOXD2O60548 495 aaPredicted RBP19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 RECQL4O94761 1208 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 B3GAT3O94766 335 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 CEBPBP17676 345 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 FGFR3P22607 806 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 CXCL12P48061 93 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 EVCP57679 992 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 SPIRE1Q08AE8 756 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 DMWDQ09019 674 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 NPY5RQ15761 445 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 SLC5A9Q2M3M2 681 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 PRR23CQ6ZRP0 262 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 PIK3AP1Q6ZUJ8 805 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 AIFM3Q96NN9 605 aa19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 EIF2AK1Q9BQI3 630 aaKnown RBP19.68■□□□□ 0.74
TSPAN3-208ENST00000560514 CHD8Q9HCK8 2581 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 CSRP2Q16527 193 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 IL31Q6EBC2 164 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 MAEAQ7L5Y9 396 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 CORO1BQ9BR76 489 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 BACE2Q9Y5Z0 518 aa19.67■□□□□ 0.74
TSPAN3-208ENST00000560514 USO1O60763 962 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 LYPLA2O95372 231 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 TDGF1P13385 188 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 GDI1P31150 447 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 RARRES1P49788 294 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 PRPF4BQ13523 1007 aaKnown RBP19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 PDZD4Q76G19 769 aaPredicted RBP19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 ELMOD1Q8N336 334 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 C2orf40Q9H1Z8 148 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 ANGPTL2Q9UKU9 493 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 PCDHA12Q9UN75 941 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 PIAS3Q9Y6X2 628 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 TICRRQ7Z2Z1 1910 aa19.66■□□□□ 0.74
TSPAN3-208ENST00000560514 ZFHX4Q86UP3 3567 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 TMEM189-UBE2V1I3L0A0 370 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 PSMC3P17980 439 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 LIG1P18858 919 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 CNR2P34972 360 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 STK3Q13188 491 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 MAPK6Q16659 721 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 FAM78AQ5JUQ0 283 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 CYP4A22Q5TCH4 519 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 NOSTRINQ8IVI9 506 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 ZNF461Q8TAF7 563 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 UROC1Q96N76 676 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 PDZD7Q9H5P4 517 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 ZNF334Q9HCZ1 680 aaPredicted RBP19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 GDAQ9Y2T3 454 aa19.65■□□□□ 0.74
TSPAN3-208ENST00000560514 ARHGEF37A1IGU5 675 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 CDKL5O76039 1030 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 TKTP29401 623 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 RBM25P49756 843 aaKnown RBP19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 SATB1Q01826 763 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 NAB2Q15742 525 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 FAM187BQ17R55 369 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 IQCEQ6IPM2 695 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 CEP68Q76N32 757 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 RUFY3Q7L099 469 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 ZNF687Q8N1G0 1237 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 MCPH1Q8NEM0 835 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 PIGOQ8TEQ8 1089 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 DEPDC1BQ8WUY9 529 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 ZNF274Q96GC6 653 aaPredicted RBP19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 HSD17B14Q9BPX1 270 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 FZD8Q9H461 694 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 CYP4F11Q9HBI6 524 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 TRPV5Q9NQA5 729 aa19.64■□□□□ 0.73
TSPAN3-208ENST00000560514 CHURC1-FNTBB4DL54 471 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 ZNF263O14978 683 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 MICAL2O94851 1124 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 FCARP24071 287 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 FNTBP49356 437 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 CLCNKBP51801 687 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 ARPP19P56211 112 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 ROR1Q01973 937 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 LRRC32Q14392 662 aa19.63■□□□□ 0.73
TSPAN3-208ENST00000560514 GLRA4Q5JXX5 417 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms