RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CXCL8P10145 99 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 IGFBP4P22692 258 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 OR1G1P47890 313 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 SLC11A1P49279 550 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 PNOCQ13519 176 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 NAB2Q15742 525 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 NFIL3Q16649 462 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 SPRED2Q7Z698 418 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 SLC9A9Q8IVB4 645 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 GPD1LQ8N335 351 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 TRIML1Q8N9V2 468 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 CLSTN2Q9H4D0 955 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 DNAJB4Q9UDY4 337 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 TRAF3IP3Q9Y228 551 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 PCDHA5Q9Y5H7 936 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 CHD9Q3L8U1 2897 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 CHD7Q9P2D1 2997 aa15.2■□□□□ 0.02
PKNOX1-209ENST00000560448 CDH23Q9H251 3354 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 CALUO43852 315 aaPredicted RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 HOXD13P35453 343 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 STIM1Q13586 685 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 ENOX2Q16206 610 aaKnown RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 BRSK2Q8IWQ3 736 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 FBXL18Q96ME1 805 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 CDCA3Q99618 268 aaPredicted RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 NUP62CLQ9H1M0 184 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 NSUN3Q9H649 340 aaKnown RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 ALG13Q9NP73 1137 aaKnown RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 IRAK3Q9Y616 596 aa15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 SF3B1O75533 1304 aaKnown RBP eCLIP15.19■□□□□ 0.023e-6■■■■■ 137.9
PKNOX1-209ENST00000560448 PDCD11Q14690 1871 aaKnown RBP15.19■□□□□ 0.02
PKNOX1-209ENST00000560448 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 GRM6O15303 877 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 TRAPPC3O43617 180 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 TNFSF9P41273 254 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 ACOT2P49753 483 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 FOXR2Q6PJQ5 311 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 KCTD10Q9H3F6 313 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 HSPBP1Q9NZL4 362 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
PKNOX1-209ENST00000560448 FSCN2O14926 492 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 SOD2P04179 222 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CTSAP10619 480 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 RPL13P26373 211 aaKnown RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 LRPAP1P30533 357 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CREMQ03060 361 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 ENPEPQ07075 957 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 SMC1AQ14683 1233 aaKnown RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 ZBTB6Q15916 424 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 UPP1Q16831 310 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 EDRF1Q3B7T1 1238 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 PDXDC1Q6P996 788 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 USP37Q86T82 979 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 NELFCDQ8IXH7 590 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CACTINQ8WUQ7 758 aaKnown RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 FAM213AQ9BRX8 229 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TRIP11Q15643 1979 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 PLXNA4Q9HCM2 1894 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 ARHGEF37A1IGU5 675 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 LACTBL1A8MY62 500 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TISP43B9A030 160 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 RFXAPO00287 272 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 MAPK13O15264 365 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TADA2AO75478 443 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 EFEMP2O95967 443 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 C1RP00736 705 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CAMK1Q14012 370 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TMEM132DQ14C87 1099 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 SEZ6Q53EL9 994 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 SPATA1Q5VX52 437 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TMC7Q7Z402 723 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 MAFAQ8NHW3 353 aaPredicted RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 TCF25Q9BQ70 676 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 HERC2P3Q9BVR0 1158 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 MARCH5Q9NX47 278 aa15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 PRG3Q9Y2Y8 225 aaPredicted RBP15.17■□□□□ 0.02
PKNOX1-209ENST00000560448 CASTOR2A6NHX0 329 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 NT5C1B-RDH14C9J2C7 533 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 PSMA7O14818 248 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 B4GALT3O60512 393 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 B3GAT3O94766 335 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 PBX3P40426 434 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 USP41Q3LFD5 358 aa15.16■□□□□ 0.02
PKNOX1-209ENST00000560448 ZBTB41Q5SVQ8 909 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms