RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MICAL1Q8TDZ2 1067 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 GPR62Q9BZJ7 368 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 IGFLR1Q9H665 355 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 EXOC1Q9NV70 894 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 BRWD1Q9NSI6 2320 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 NRIP1P48552 1158 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 CLCNKBP51801 687 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 HSP90AA2PQ14568 343 aaPredicted RBP20.38■□□□□ 0.85
CASC4-209ENST00000559222 TMC7Q7Z402 723 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 VN1R2Q8NFZ6 395 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 FAM212AQ96EL1 285 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 EXOC7Q9UPT5 735 aa20.38■□□□□ 0.85
CASC4-209ENST00000559222 SPTBN5Q9NRC6 3674 aaKnown RBP20.37■□□□□ 0.85
CASC4-209ENST00000559222 C2orf71A6NGG8 1288 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 GLP2RO95838 553 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 NFICP08651 508 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 DLX2Q07687 328 aaPredicted RBP20.37■□□□□ 0.85
CASC4-209ENST00000559222 POSTNQ15063 836 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 FUT10Q6P4F1 479 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 FAM213AQ9BRX8 229 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 HERC2P3Q9BVR0 1158 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 RPF1Q9H9Y2 349 aaKnown RBP20.37■□□□□ 0.85
CASC4-209ENST00000559222 PUF60Q9UHX1 559 aaKnown RBP20.37■□□□□ 0.85
CASC4-209ENST00000559222 ADAM28Q9UKQ2 775 aa20.37■□□□□ 0.85
CASC4-209ENST00000559222 I3L4J1 428 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 ADRB2P07550 413 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 CTSAP10619 480 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 CA8P35219 290 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 PPP2R3AQ06190 1150 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 COL19A1Q14993 1142 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 PTPN14Q15678 1187 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 BMT2Q1RMZ1 405 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 JADE1Q6IE81 842 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 SLFN12LQ6IEE8 588 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 NOC3LQ8WTT2 800 aaKnown RBP20.36■□□□□ 0.85
CASC4-209ENST00000559222 KIF12Q96FN5 646 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 COLEC11Q9BWP8 271 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 TMEM206Q9H813 350 aa20.36■□□□□ 0.85
CASC4-209ENST00000559222 UBE4BO95155 1302 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.35■□□□□ 0.85
CASC4-209ENST00000559222 C2CD2LO14523 706 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 PPEF2O14830 753 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 CLIC2O15247 247 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 TBX10O75333 385 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 CXCL14O95715 111 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 SOD2P04179 222 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 GARTP22102 1010 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 LTBRP36941 435 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 BRCC3P46736 316 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 SMC1AQ14683 1233 aaKnown RBP20.35■□□□□ 0.85
CASC4-209ENST00000559222 ZBTB6Q15916 424 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 DUSP6Q16828 381 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 UPP1Q16831 310 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 SCARA3Q6AZY7 606 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 STXBP4Q6ZWJ1 553 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.35■□□□□ 0.85
CASC4-209ENST00000559222 EFCAB13Q8IY85 973 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 UBE2ZQ9H832 354 aaPredicted RBP20.35■□□□□ 0.85
CASC4-209ENST00000559222 AGPAT3Q9NRZ7 376 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 CLDND1Q9NY35 253 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 THEGQ9P2T0 379 aa20.35■□□□□ 0.85
CASC4-209ENST00000559222 TSC2P49815 1807 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 PODXLO00592 558 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 LILRB3O75022 631 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 RHOBTB3O94955 611 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 MYL1P05976 194 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 CTC1Q2NKJ3 1217 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 EP400NLQ6ZTU2 488 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 SMYD4Q8IYR2 804 aaPredicted RBP20.34■□□□□ 0.85
CASC4-209ENST00000559222 MRPL43Q8N983 215 aaKnown RBP20.34■□□□□ 0.85
CASC4-209ENST00000559222 TLE6Q9H808 572 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 PLEKHA5Q9HAU0 1116 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 NGRNQ9NPE2 291 aaKnown RBP20.34■□□□□ 0.85
CASC4-209ENST00000559222 MAPK8IP1Q9UQF2 711 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 SCN1AP35498 2009 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 XIRP2A4UGR9 3374 aa20.34■□□□□ 0.85
CASC4-209ENST00000559222 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
CASC4-209ENST00000559222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.33■□□□□ 0.85
CASC4-209ENST00000559222 H3BQ06 376 aaPredicted RBP20.33■□□□□ 0.85
CASC4-209ENST00000559222 PRPF40AO75400 957 aaKnown RBP20.33■□□□□ 0.85
CASC4-209ENST00000559222 TADA2AO75478 443 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 KCNQ1P51787 676 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 KYAT1Q16773 422 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 RTP2Q5QGT7 225 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 LLGL2Q6P1M3 1020 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 CBWD2Q8IUF1 395 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 BRSK2Q8IWQ3 736 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 HLA-CQ95604 372 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 PABPC5Q96DU9 382 aaKnown RBP20.33■□□□□ 0.85
CASC4-209ENST00000559222 KCTD10Q9H3F6 313 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 SLC38A7Q9NVC3 462 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 HSPBP1Q9NZL4 362 aa20.33■□□□□ 0.85
CASC4-209ENST00000559222 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.85
CASC4-209ENST00000559222 VCANP13611 3396 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 TMEM189-UBE2V1I3L0A0 370 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 EXTL3O43909 919 aa20.32■□□□□ 0.84
CASC4-209ENST00000559222 CLASP2O75122 1294 aaKnown RBP20.32■□□□□ 0.84
CASC4-209ENST00000559222 B3GAT3O94766 335 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms