RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 JAM3Q9BX67 310 aa5□□□□□ -1.61
SPG11-211ENST00000558561 NAPBQ9H115 298 aa5□□□□□ -1.61
SPG11-211ENST00000558561 CDIP1Q9H305 208 aa5□□□□□ -1.61
SPG11-211ENST00000558561 ZNF552Q9H707 407 aaPredicted RBP5□□□□□ -1.61
SPG11-211ENST00000558561 MTMR4Q9NYA4 1195 aa5□□□□□ -1.61
SPG11-211ENST00000558561 FAM53CQ9NYF3 392 aa5□□□□□ -1.61
SPG11-211ENST00000558561 TMOD4Q9NZQ9 345 aa5□□□□□ -1.61
SPG11-211ENST00000558561 SWAP70Q9UH65 585 aa5□□□□□ -1.61
SPG11-211ENST00000558561 NDOR1Q9UHB4 597 aa5□□□□□ -1.61
SPG11-211ENST00000558561 SIT1Q9Y3P8 196 aa5□□□□□ -1.61
SPG11-211ENST00000558561 PCDHA9Q9Y5H5 950 aa5□□□□□ -1.61
SPG11-211ENST00000558561 PCDHA8Q9Y5H6 950 aa5□□□□□ -1.61
SPG11-211ENST00000558561 HTTP42858 3142 aa5□□□□□ -1.61
SPG11-211ENST00000558561 TNRC18O15417 2968 aaPredicted RBP5□□□□□ -1.61
SPG11-211ENST00000558561 CCDC171Q6TFL3 1326 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 B4E1Z4 1266 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TNPO2O14787 897 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 RANBP6O60518 1105 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 DTNBO60941 627 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ASMTLO95671 621 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 CRTAMO95727 393 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 PGK2P07205 417 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 CCND3P30281 292 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 SLC16A2P36021 539 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 YBX1P67809 324 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 IRX3P78415 501 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 GUCY1A3Q02108 690 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ICA1Q05084 483 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 COG2Q14746 738 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 SLC35G1Q2M3R5 365 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TKFCQ3LXA3 575 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TMEM63BQ5T3F8 832 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ANO1Q5XXA6 986 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 WWC2Q6AWC2 1192 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 PAQR3Q6TCH7 311 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TMEM179Q6ZVK1 233 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 KCTD1Q719H9 257 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 MAMDC2Q7Z304 686 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 HOMER1Q86YM7 354 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 CPXCR1Q8N123 301 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TRPV1Q8NER1 839 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 REPS2Q8NFH8 660 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 GPRC5AQ8NFJ5 357 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 SMCR8Q8TEV9 937 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 TRIB2Q92519 343 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TBC1D5Q92609 795 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ZNF333Q96JL9 665 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 CCDC17Q96LX7 622 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 PARK7Q99497 189 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 FEZ1Q99689 392 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 KCNJ15Q99712 375 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ZFYVE21Q9BQ24 234 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 TMEM47Q9BQJ4 181 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 MOV10L1Q9BXT6 1211 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 VCPKMTQ9H867 229 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 NCOA5Q9HCD5 579 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 ZCCHC17Q9NP64 241 aaKnown RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 NYAP2Q9P242 653 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ARPP21Q9UBL0 812 aaPredicted RBP4.99□□□□□ -1.61
SPG11-211ENST00000558561 MORF4L1Q9UBU8 362 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 ADAMTS5Q9UNA0 930 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 SLC45A1Q9Y2W3 748 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 RNF114Q9Y508 228 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 X6R8D5 127 aa4.99□□□□□ -1.61
SPG11-211ENST00000558561 NEDD4P46934 1319 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 FRMPD2Q68DX3 1309 aaPredicted RBP4.98□□□□□ -1.61
SPG11-211ENST00000558561 MYPNQ86TC9 1320 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 MCM3APO60318 1980 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 MYOCOSA0A1B0GUC4 107 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 TMEM232C9JQI7 657 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 H7BY64 318 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 SGSM2O43147 1006 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 FLOT1O75955 427 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CYBBP04839 570 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CYP21A2P08686 494 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 GOLGA8HP0CJ92 632 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 TSPY3P0CV98 308 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 TSPY8P0CW00 308 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CCL5P13501 91 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CPA1P15085 419 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 GNAT2P19087 354 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 VIPR1P32241 457 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CYP2C19P33261 490 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 NOVP48745 357 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 PRR5P85299 388 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CACNB2Q08289 660 aaPredicted RBP4.98□□□□□ -1.61
SPG11-211ENST00000558561 PLS1Q14651 629 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 PKN2Q16513 984 aaKnown RBP4.98□□□□□ -1.61
SPG11-211ENST00000558561 AKNAD1Q5T1N1 836 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 WDR78Q5VTH9 848 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 SLFN13Q68D06 897 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 TMED8Q6PL24 325 aaPredicted RBP4.98□□□□□ -1.61
SPG11-211ENST00000558561 GPR142Q7Z601 462 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CABP7Q86V35 215 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 RAB11FIP4Q86YS3 637 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 CERS3Q8IU89 383 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 Q8N1Y9 231 aa4.98□□□□□ -1.61
SPG11-211ENST00000558561 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms