RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 DUSP9Q99956 384 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 SRRTQ9BXP5 876 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 CWH43Q9H720 699 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 NRDE2Q9H7Z3 1164 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 SLC28A3Q9HAS3 691 aa11.36□□□□□ -0.59
LRRC28-204ENST00000558172 METTL14Q9HCE5 456 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
LRRC28-204ENST00000558172 TMEM265A0A087WTH1 108 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 LINC01553A4QN01 128 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 MEFVO15553 781 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 AKAP3O75969 853 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 DDHD2O94830 711 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 RB1P06400 928 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 CA3P07451 260 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 KRT13P13646 458 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 DNAJB2P25686 324 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 RPL9P32969 192 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 PBX2P40425 430 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 ALDH7A1P49419 539 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 AFF1P51825 1210 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 DSC1Q08554 894 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 NAB2Q15742 525 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 DUOXA2Q1HG44 320 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 GLRA4Q5JXX5 417 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 SPATA1Q5VX52 437 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 JADE1Q6IE81 842 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 FRMD5Q7Z6J6 570 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 ZNF280BQ86YH2 543 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 WDR49Q8IV35 697 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 COLGALT2Q8IYK4 626 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 BEST2Q8NFU1 509 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 ENOX1Q8TC92 643 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 PARD3BQ8TEW8 1205 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 TIFAQ96CG3 184 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 TGS1Q96RS0 853 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 BPIFA3Q9BQP9 254 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 PLVAPQ9BX97 442 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 PDE11AQ9HCR9 933 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 FAN1Q9Y2M0 1017 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 PCDHB12Q9Y5F1 795 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
LRRC28-204ENST00000558172 SCN1AP35498 2009 aa11.35□□□□□ -0.59
LRRC28-204ENST00000558172 LCHNA4D1U4 455 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 SMTNL1A8MU46 457 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 IKBKBO14920 756 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 STX10O60499 249 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 GALTP07902 379 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 MYOGP15173 224 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 TNNI1P19237 187 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 PAX3P23760 479 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 PPM1AP35813 382 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 BMPR1AP36894 532 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 OR1G1P47890 313 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
LRRC28-204ENST00000558172 BCAR1P56945 870 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ERVK-21P61565 698 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 CLDN10P78369 228 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 BFSP1Q12934 665 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ANO6Q4KMQ2 910 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 CCDC127Q96BQ5 260 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ANKRD36BP1Q96IX9 119 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ZNF558Q96NG5 402 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 MED15Q96RN5 788 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 CGRRF1Q99675 332 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 COLEC11Q9BWP8 271 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 CXCL16Q9H2A7 254 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 THAP9Q9H5L6 903 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 INTS13Q9NVM9 706 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
LRRC28-204ENST00000558172 PLAGL2Q9UPG8 496 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 PLXNA4Q9HCM2 1894 aa11.34□□□□□ -0.59
LRRC28-204ENST00000558172 C5orf67F2Z3F1 127 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-204ENST00000558172 NRP1O14786 923 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 ZC3H11AO75152 810 aaKnown RBP eCLIP11.33□□□□□ -0.6
LRRC28-204ENST00000558172 TNNC2P02585 160 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 TMEM191BP0C7N4 346 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 DLATP10515 647 aaKnown RBP11.33□□□□□ -0.6
LRRC28-204ENST00000558172 LRPAP1P30533 357 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 GTF2H1P32780 548 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 VAMP7P51809 220 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 TFAMQ00059 246 aaKnown RBP11.33□□□□□ -0.6
LRRC28-204ENST00000558172 MYL5Q02045 173 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 TAP1Q03518 808 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 SPAG1Q07617 926 aa11.33□□□□□ -0.6
LRRC28-204ENST00000558172 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms