RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 HEPACAM2A8MVW5 462 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.17
PSEN1-220ENST00000557037 GJA1P17302 382 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CTHP32929 405 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.17
PSEN1-220ENST00000557037 C19orf57Q0VDD7 668 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CCINQ13939 588 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 XKR3Q5GH77 459 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 GPIHBP1Q8IV16 184 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 MFSD6LQ8IWD5 586 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 TMEM143Q96AN5 459 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 RSPRY1Q96DX4 576 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 LNPKQ9C0E8 428 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 UNC45AQ9H3U1 944 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 SLC8A2Q9UPR5 921 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CDY1Q9Y6F8 540 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 NUP205Q92621 2012 aa13.96□□□□□ -0.17
PSEN1-220ENST00000557037 CCDC163A0A0D9SF12 145 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 HIP1O00291 1037 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 RHOBTB1O94844 696 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 ERLIN2O94905 339 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 LRG1P02750 347 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-220ENST00000557037 GRIK3Q13003 919 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 LARP1BQ659C4 914 aaKnown RBP13.95□□□□□ -0.18
PSEN1-220ENST00000557037 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 PDZD4Q76G19 769 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-220ENST00000557037 LURAP1LQ8IV03 231 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 HS6ST3Q8IZP7 471 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 ZSCAN18Q8TBC5 510 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-220ENST00000557037 MSANTD3Q96H12 275 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 SLC32A1Q9H598 525 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 INVSQ9Y283 1065 aa13.95□□□□□ -0.18
PSEN1-220ENST00000557037 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 PRRG1O14668 218 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 ZNF197O14709 1029 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 TSPAN1O60635 241 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 GAS7O60861 476 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 GBP1P32455 592 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 JAK3P52333 1124 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 IRX4P78413 519 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 PTH1RQ03431 593 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 RALGPS2Q86X27 583 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-220ENST00000557037 SYNPOQ8N3V7 929 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 ZFYVE19Q96K21 471 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 HHIPQ96QV1 700 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 TRIM6Q9C030 488 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-220ENST00000557037 CSRNP2Q9H175 543 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-220ENST00000557037 SNTG2Q9NY99 539 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 GTSE1Q9NYZ3 720 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 RAXQ9Y2V3 346 aa13.94□□□□□ -0.18
PSEN1-220ENST00000557037 MSH4O15457 936 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 PRC1O43663 620 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 MOSPD3O75425 235 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 MYL4P12829 197 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 SFNP31947 248 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 MAPK8P45983 427 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 CYP4A22Q5TCH4 519 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 RTL10Q7L3V2 364 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-220ENST00000557037 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 LENG9Q96B70 501 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 MTRRQ9UBK8 725 aa13.93□□□□□ -0.18
PSEN1-220ENST00000557037 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-220ENST00000557037 USP9XQ93008 2570 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-220ENST00000557037 CNTNAP5Q8WYK1 1306 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 ARHGEF37A1IGU5 675 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 FAM221BA6H8Z2 402 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 CHADO15335 359 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 PLA2G2AP14555 144 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 IGFBP6P24592 240 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 ELF1P32519 619 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 NPEPPSP55786 919 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 SPIRE1Q08AE8 756 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 TUSC3Q13454 348 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 TEAD2Q15562 447 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 LRCH2Q5VUJ6 765 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 ANO5Q75V66 913 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 MICU3Q86XE3 530 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms