RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 IPO9Q96P70 1041 aaKnown RBP18.6■□□□□ 0.57
PSEN1-217ENST00000556533 GPR62Q9BZJ7 368 aa18.6■□□□□ 0.57
PSEN1-217ENST00000556533 ZBP1Q9H171 429 aa18.6■□□□□ 0.57
PSEN1-217ENST00000556533 CPSF3Q9UKF6 684 aaKnown RBP18.6■□□□□ 0.57
PSEN1-217ENST00000556533 COG5Q9UP83 839 aa18.6■□□□□ 0.57
PSEN1-217ENST00000556533 MYH11P35749 1972 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 TTC26A0AVF1 554 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 C2orf71A6NGG8 1288 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 EIF3DO15371 548 aaKnown RBP eCLIP18.59■□□□□ 0.57
PSEN1-217ENST00000556533 NCK2O43639 380 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 B3GAT3O94766 335 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 KIF4AO95239 1232 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 CTSAP10619 480 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 KCNA5P22460 613 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 IGFBP6P24592 240 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-217ENST00000556533 STK4Q13043 487 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 PSMD2Q13200 908 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 LLGL2Q6P1M3 1020 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 ARMCX5Q6P1M9 558 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 DCLRE1AQ6PJP8 1040 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 ZSWIM2Q8NEG5 633 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 SCFD1Q8WVM8 642 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 CBWD1Q9BRT8 395 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 UBE2ZQ9H832 354 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-217ENST00000556533 STK39Q9UEW8 545 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 TUBGCP4Q9UGJ1 667 aa18.59■□□□□ 0.57
PSEN1-217ENST00000556533 SOD2P04179 222 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 URODP06132 367 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 GARTP22102 1010 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 DPYDQ12882 1025 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 SNW1Q13573 536 aaKnown RBP18.58■□□□□ 0.56
PSEN1-217ENST00000556533 DUSP6Q16828 381 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 FUT10Q6P4F1 479 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 TMEM130Q8N3G9 435 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 PABPC5Q96DU9 382 aaKnown RBP18.58■□□□□ 0.56
PSEN1-217ENST00000556533 DDX27Q96GQ7 796 aaKnown RBP18.58■□□□□ 0.56
PSEN1-217ENST00000556533 UROC1Q96N76 676 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 HERC2P3Q9BVR0 1158 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 MRPL17Q9NRX2 175 aaKnown RBP18.58■□□□□ 0.56
PSEN1-217ENST00000556533 EYSQ5T1H1 3165 aa18.58■□□□□ 0.56
PSEN1-217ENST00000556533 SF3B1O75533 1304 aaKnown RBP eCLIP18.57■□□□□ 0.566e-7■■■■■ 93.2
PSEN1-217ENST00000556533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 H3BQ06 376 aaPredicted RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 PODXLO00592 558 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 CLIC2O15247 247 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 PRPF40AO75400 957 aaKnown RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 GLUD2P49448 558 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 NDUFV1P49821 464 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 MRPS5P82675 430 aaKnown RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 RBM10P98175 930 aaKnown RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 ADAM15Q13444 863 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 PNOCQ13519 176 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 PTPN14Q15678 1187 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 CLUL1Q15846 466 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 UPP1Q16831 310 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 USP41Q3LFD5 358 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 FAM171A1Q5VUB5 890 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 JADE1Q6IE81 842 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 CRELD2Q6UXH1 353 aaPredicted RBP18.57■□□□□ 0.56
PSEN1-217ENST00000556533 CEP57Q86XR8 500 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 EFHBQ8N7U6 833 aa18.57■□□□□ 0.56
PSEN1-217ENST00000556533 UBE4BO95155 1302 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 I3L4J1 428 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 EXTL3O43909 919 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 CLASP2O75122 1294 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 LDHAP00338 332 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 NFICP08651 508 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 RPL9P32969 192 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 CYP2J2P51589 502 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 GUCY2FP51841 1108 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 KNOP1Q1ED39 458 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 AAK1Q2M2I8 961 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 HS2ST1Q7LGA3 356 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 CD302Q8IX05 232 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 ATXN2LQ8WWM7 1075 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 RIN2Q8WYP3 895 aaPredicted RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 CDCA3Q99618 268 aaPredicted RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 EMILIN2Q9BXX0 1053 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 HOOK1Q9UJC3 728 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 UBQLN1Q9UMX0 589 aaKnown RBP18.56■□□□□ 0.56
PSEN1-217ENST00000556533 MAPK8IP1Q9UQF2 711 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 PLXNA4Q9HCM2 1894 aa18.56■□□□□ 0.56
PSEN1-217ENST00000556533 REV3LO60673 3130 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 TGFB1I1O43294 461 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 XPOTO43592 962 aaKnown RBP18.55■□□□□ 0.56
PSEN1-217ENST00000556533 KINO60870 393 aaKnown RBP18.55■□□□□ 0.56
PSEN1-217ENST00000556533 KLRC2P26717 231 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 KCNQ1P51787 676 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 DLX2Q07687 328 aaPredicted RBP18.55■□□□□ 0.56
PSEN1-217ENST00000556533 CTC1Q2NKJ3 1217 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 KIAA0319Q5VV43 1072 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 RDH13Q8NBN7 331 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 KIAA0895Q8NCT3 520 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 C3orf58Q8NDZ4 430 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 ERCC4Q92889 916 aaPredicted RBP18.55■□□□□ 0.56
PSEN1-217ENST00000556533 ASB2Q96Q27 587 aa18.55■□□□□ 0.56
PSEN1-217ENST00000556533 AGPAT3Q9NRZ7 376 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms