RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ATXN2LQ8WWM7 1075 aaKnown RBP5.98□□□□□ -1.45
SRP54-211ENST00000556445 MTMR8Q96EF0 704 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 TACO1Q9BSH4 297 aaKnown RBP5.98□□□□□ -1.45
SRP54-211ENST00000556445 SELENOOQ9BVL4 669 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 TARS2Q9BW92 718 aaKnown RBP5.98□□□□□ -1.45
SRP54-211ENST00000556445 RHOBTB2Q9BYZ6 727 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 PUF60Q9UHX1 559 aaKnown RBP5.98□□□□□ -1.45
SRP54-211ENST00000556445 AOX1Q06278 1338 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 LTBP4Q8N2S1 1624 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ANO9A1A5B4 782 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 KCNQ3O43525 872 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 PIP5K1CO60331 668 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 MPIG6BO95866 241 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ZSCAN20P17040 1043 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 PPM1FP49593 454 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 GEMIN4P57678 1058 aaKnown RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 HERVK_113P62684 666 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 MTX1Q13505 466 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 CPZQ66K79 652 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 CXorf57Q6NSI4 855 aaKnown RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 EP400NLQ6ZTU2 488 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 TOGARAM2Q6ZUX3 1019 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 LHFPL2Q6ZUX7 228 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 SKAP1Q86WV1 359 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ERC1Q8IUD2 1116 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 IGSF22Q8N9C0 903 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 SSH3Q8TE77 659 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 JPH3Q8WXH2 748 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 TIFAQ96CG3 184 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ERP27Q96DN0 273 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 AJUBAQ96IF1 538 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ANP32EQ9BTT0 268 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 LRRCC1Q9C099 1032 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 USP44Q9H0E7 712 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 CCDC8Q9H0W5 538 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 IFT122Q9HBG6 1241 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 BARX1Q9HBU1 254 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 C9orf78Q9NZ63 289 aaPredicted RBP5.97□□□□□ -1.45
SRP54-211ENST00000556445 ARHGAP28Q9P2N2 729 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 POLG2Q9UHN1 485 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 KCNG1Q9UIX4 513 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 ASAP1Q9ULH1 1129 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 LAMB4A4D0S4 1761 aa5.97□□□□□ -1.45
SRP54-211ENST00000556445 PRAMEF25A6NGN4 478 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 H0Y858 1186 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 LAMTOR5O43504 91 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 DNAJC8O75937 253 aaPredicted RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 NPTXRO95502 500 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 TYRP1P17643 537 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 PTGS1P23219 599 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 MC4RP32245 332 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 CSF2RBP32927 897 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 EPHB4P54760 987 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 SLC4A8Q2Y0W8 1093 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 FNDC3BQ53EP0 1204 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 TMEM177Q53S58 311 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 HYIQ5T013 277 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 TTC22Q5TAA0 569 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 RNF219Q5W0B1 726 aaPredicted RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 DDX46Q7L014 1031 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 GET4Q7L5D6 327 aaPredicted RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 PLEKHH3Q7Z736 793 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 SUGP1Q8IWZ8 645 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 PPHLN1Q8NEY8 458 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 WDR66Q8TBY9 1149 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 DLG3Q92796 817 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 KIF1BPQ96EK5 621 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 ZNF496Q96IT1 587 aaPredicted RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 ELAC2Q9BQ52 826 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 KATNBL1Q9H079 304 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 CLIC5Q9NZA1 410 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 PPP4R1LQ9P1A2 415 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 MAP3K2Q9Y2U5 619 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 IPPQ9Y573 584 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 B3GALT1Q9Y5Z6 326 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 LRRFIP2Q9Y608 721 aaKnown RBP5.96□□□□□ -1.46
SRP54-211ENST00000556445 UTYO14607 1347 aa5.96□□□□□ -1.46
SRP54-211ENST00000556445 ADCY9O60503 1353 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 COL15A1P39059 1388 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 PLCH1Q4KWH8 1693 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 GRM8O00222 908 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SCDO00767 359 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 GPR39O43194 453 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 PHLPP1O60346 1717 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 MMEP08473 750 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 MECP2P51608 486 aaKnown RBP5.95□□□□□ -1.46
SRP54-211ENST00000556445 ZNF280AP59817 542 aaPredicted RBP5.95□□□□□ -1.46
SRP54-211ENST00000556445 SLC39A6Q13433 755 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 TCIRG1Q13488 830 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 KRT72Q14CN4 511 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SURF1Q15526 300 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 CCDC96Q2M329 555 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SPATS1Q496A3 300 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 CREBRFQ8IUR6 639 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 REXO1L1PQ8IX06 675 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 PLBD2Q8NHP8 589 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SKA1Q96BD8 255 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 MPP4Q96JB8 637 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms