RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 NRDE2Q9H7Z3 1164 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
SYNE2-219ENST00000555323 PDE11AQ9HCR9 933 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 YBX2Q9Y2T7 364 aaKnown RBP13.76□□□□□ -0.21
SYNE2-219ENST00000555323 LINC01553A4QN01 128 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 ALDH2P05091 517 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
SYNE2-219ENST00000555323 KCNA4P22459 653 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 ZNF445P59923 1031 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 TUSC3Q13454 348 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
SYNE2-219ENST00000555323 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 JADE1Q6IE81 842 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
SYNE2-219ENST00000555323 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
SYNE2-219ENST00000555323 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
SYNE2-219ENST00000555323 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
SYNE2-219ENST00000555323 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 C5orf67F2Z3F1 127 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 XPOTO43592 962 aaKnown RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 B4GALT3O60512 393 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 CA3P07451 260 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 GALTP07902 379 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 NFICP08651 508 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 LRPAP1P30533 357 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 RPL9P32969 192 aaKnown RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 ZNF165P49910 485 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 VAMP7P51809 220 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 AP3M2P53677 418 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 TAP1Q03518 808 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 SPAG1Q07617 926 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 BFSP1Q12934 665 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 NCAPHQ15003 741 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 USP37Q86T82 979 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 CACTINQ8WUQ7 758 aaKnown RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 UROC1Q96N76 676 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 SAMD11Q96NU1 681 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 FAM193BQ96PV7 902 aaPredicted RBP13.74□□□□□ -0.21
SYNE2-219ENST00000555323 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
SYNE2-219ENST00000555323 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 LRRIQ3A6PVS8 624 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 ARHGEF15O94989 841 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 C4BPAP04003 597 aaKnown RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 RB1P06400 928 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 KRT13P13646 458 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 LAG3P18627 525 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 DNAJB2P25686 324 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 GTF2H1P32780 548 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 ALDH7A1P49419 539 aaKnown RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 BCAR1P56945 870 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 ERVK-21P61565 698 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 DLG4P78352 724 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 MYL5Q02045 173 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 IQCB1Q15051 598 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 UPP1Q16831 310 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 DCLRE1AQ6PJP8 1040 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 BEST2Q8NFU1 509 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 C18orf25Q96B23 403 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 ARMCX3Q9UH62 379 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-219ENST00000555323 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
SYNE2-219ENST00000555323 LAMA3Q16787 3333 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TMEM265A0A087WTH1 108 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 PIRO00625 290 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 NRP1O14786 923 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 EFEMP2O95967 443 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms