RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 AGO3Q9H9G7 860 aaKnown RBP6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 F2RL2O00254 374 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 CFPP27918 469 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 PRDX5P30044 214 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 AK2P54819 239 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 APOA5Q6Q788 366 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 NLGN4YQ8NFZ3 816 aaPredicted RBP6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 TNIP3Q96KP6 325 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZNF512Q96ME7 567 aaPredicted RBP6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 ELAC2Q9BQ52 826 aaKnown RBP6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 MRI1Q9BV20 369 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 C22orf23Q9BZE7 217 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZMAT3Q9HA38 289 aaKnown RBP6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 CLCA2Q9UQC9 943 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
CKS1BP1-201ENST00000555221 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 CXorf49A8MYA2 514 aaPredicted RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 WNT10BO00744 389 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 GRM6O15303 877 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 TRIM13O60858 407 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 GNAI3P08754 354 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 ALAS1P13196 640 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 SLC5A1P13866 664 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PIK3CGP48736 1102 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 CLRN1P58418 232 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 GNAI1P63096 354 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 FKBP15Q5T1M5 1219 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 DOK3Q7L591 496 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 APBB1IPQ7Z5R6 666 aaPredicted RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 FAM83AQ86UY5 434 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 FAM90A1Q86YD7 464 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 DCBLD1Q8N8Z6 715 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 SYT8Q8NBV8 401 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 GIMAP8Q8ND71 665 aaPredicted RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 IL17RDQ8NFM7 739 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 APIPQ96GX9 242 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PLA2G12BQ9BX93 195 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PACSIN1Q9BY11 444 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 BTBD1Q9H0C5 482 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 MRPL46Q9H2W6 279 aaKnown RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 ATP6V0A4Q9HBG4 840 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 KLHL11Q9NVR0 708 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PIH1D1Q9NWS0 290 aaKnown RBP6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 STAP2Q9UGK3 403 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 SLC23A1Q9UHI7 598 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 CPA4Q9UI42 421 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PHTF1Q9UMS5 762 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 PCDHA1Q9Y5I3 950 aa6.73□□□□□ -1.33
CKS1BP1-201ENST00000555221 ISM1B1AKI9 464 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 FOXN3O00409 490 aaPredicted RBP6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 TPD52L2O43399 206 aaKnown RBP6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 AMHP03971 560 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 INHBBP09529 407 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 MYF5P13349 255 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 GNAT2P19087 354 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 DUSP8Q13202 625 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 GRM7Q14831 915 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 VPS72Q15906 364 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 FAM214AQ32MH5 1076 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 EMC10Q5UCC4 262 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 TAX1BP1Q86VP1 789 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 C1QL4Q86Z23 238 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 AOPEPQ8N6M6 819 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZFP28Q8NHY6 868 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 IL31RAQ8NI17 732 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 ANKS1AQ92625 1134 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 GJA10Q969M2 543 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 MPHOSPH9Q99550 1183 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 MYD88Q99836 296 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 RTEL1Q9NZ71 1219 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZDHHC8Q9ULC8 765 aa6.72□□□□□ -1.33
CKS1BP1-201ENST00000555221 TBKBP1A7MCY6 615 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 KIAA0391O15091 583 aaKnown RBP6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 STC2O76061 302 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 IPO13O94829 963 aaKnown RBP6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 MYL3P08590 195 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC7A1P30825 629 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 CNR2P34972 360 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 HTR3AP46098 478 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 BMT2Q1RMZ1 405 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 LONRF3Q496Y0 759 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZNF529Q6P280 563 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 PPP1R3BQ86XI6 285 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC35B2Q8TB61 432 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 SUCLG2Q96I99 432 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 MYOCQ99972 504 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 NDC1Q9BTX1 674 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 APOL5Q9BWW9 433 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 KIAA1586Q9HCI6 787 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 RLIMQ9NVW2 624 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms