RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 KIAA1586Q9HCI6 787 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 AGPAT3Q9NRZ7 376 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 LACTBL1A8MY62 500 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 XPOTO43592 962 aaKnown RBP26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 IL18RAPO95256 599 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 CYP3A5P20815 502 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 RPL9P32969 192 aaKnown RBP26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 ERVFC1P60507 584 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 ZBTB6Q15916 424 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 NELFCDQ8IXH7 590 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 RNF168Q8IYW5 571 aaPredicted RBP26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 GPD1LQ8N335 351 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 MICALL1Q8N3F8 863 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 ADAM28Q9UKQ2 775 aa26.34■■□□□ 1.81
SDR39U1-209ENST00000554947 CASTOR2A6NHX0 329 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 NCK2O43639 380 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 CTSAP10619 480 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 IRS1P35568 1242 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 UPP1Q16831 310 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 DCLRE1AQ6PJP8 1040 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 NT5DC4Q86YG4 428 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 BRSK2Q8IWQ3 736 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 VPS52Q8N1B4 723 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 SMARCE1Q969G3 411 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 TCF25Q9BQ70 676 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 FAM213AQ9BRX8 229 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 VN1R3Q9BXE9 311 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 ZBP1Q9H171 429 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 ENTPD7Q9NQZ7 604 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 UBQLN1Q9UMX0 589 aaKnown RBP26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 C2CD2Q9Y426 696 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 PCDHA5Q9Y5H7 936 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 IRAK3Q9Y616 596 aa26.33■■□□□ 1.81
SDR39U1-209ENST00000554947 FSD2A1L4K1 749 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 PDXKO00764 312 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 SOD2P04179 222 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 SOX4Q06945 474 aaPredicted RBP26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 SMC1AQ14683 1233 aaKnown RBP26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 COBLL1Q53SF7 1204 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 TCEAL5Q5H9L2 206 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 TMC7Q7Z402 723 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 GPR65Q8IYL9 337 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 GUF1Q8N442 669 aaKnown RBP26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 MICAL1Q8TDZ2 1067 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 SAAL1Q96ER3 474 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 KIF12Q96FN5 646 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 FBXL18Q96ME1 805 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 PAAF1Q9BRP4 392 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 HERC2P3Q9BVR0 1158 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 KCTD10Q9H3F6 313 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 HSPBP1Q9NZL4 362 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 BRWD1Q9NSI6 2320 aa26.32■■□□□ 1.8
SDR39U1-209ENST00000554947 TADA2AO75478 443 aa26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 LRPAP1P30533 357 aa26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 ELAVL2Q12926 359 aaKnown RBP26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 CCDC85BQ15834 202 aaPredicted RBP26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 FUT10Q6P4F1 479 aa26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 CDCA3Q99618 268 aaPredicted RBP26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 PCIF1Q9H4Z3 704 aa26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 SSX2IPQ9Y2D8 614 aa26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 SF3B1O75533 1304 aaKnown RBP eCLIP26.31■■□□□ 1.8
SDR39U1-209ENST00000554947 KIF4AO95239 1232 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 CLCNKBP51801 687 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 COL19A1Q14993 1142 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 ZNF658Q5TYW1 1059 aaPredicted RBP26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 SLC9A9Q8IVB4 645 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 MRPL43Q8N983 215 aaKnown RBP26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 C18orf25Q96B23 403 aaPredicted RBP26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 LMBRD1Q9NUN5 540 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 REV3LO60673 3130 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 EYSQ5T1H1 3165 aa26.3■■□□□ 1.8
SDR39U1-209ENST00000554947 ZNF233A6NK53 670 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 GOLGA6L22H0YM25 854 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 MYBPC2Q14324 1141 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 TMEM132DQ14C87 1099 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 SURF1Q15526 300 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 SPATA1Q5VX52 437 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 PLPP4Q5VZY2 271 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 JADE1Q6IE81 842 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 XXYLT1Q8NBI6 393 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 ZSWIM2Q8NEG5 633 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 BEST2Q8NFU1 509 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 PPM1EQ8WY54 764 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 FAM212AQ96EL1 285 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 GOLGA2P5Q9HBQ8 144 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 RBAKQ9NYW8 714 aaPredicted RBP26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 CACNG4Q9UBN1 327 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 TRAF3IP3Q9Y228 551 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 VWA8A3KMH1 1905 aa26.29■■□□□ 1.8
SDR39U1-209ENST00000554947 C2orf71A6NGG8 1288 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 F8W810 466 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 PODXLO00592 558 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 B3GAT3O94766 335 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 NFIL3Q16649 462 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 USP41Q3LFD5 358 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 GPR62Q9BZJ7 368 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 CHST7Q9NS84 486 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 TUBGCP4Q9UGJ1 667 aa26.28■■□□□ 1.8
SDR39U1-209ENST00000554947 GOLGA8IPA6NC78 632 aa26.27■■□□□ 1.8
SDR39U1-209ENST00000554947 GOLGA8JA6NMD2 632 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms