RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 GPR152Q8TDT2 470 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 DHX58Q96C10 678 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 TBC1D17Q9HA65 648 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 KLK14Q9P0G3 267 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 SERTAD1Q9UHV2 236 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 ADAM28Q9UKQ2 775 aa15.4■□□□□ 0.06
SPTLC2-202ENST00000554365 TADA2AO75478 443 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 DGAT1O75907 488 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 LYPLA2O95372 231 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 LAMP2P13473 410 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 MUTP22033 750 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 ZRSR1Q15695 479 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 SLC27A1Q6PCB7 646 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 NXPE3Q969Y0 559 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 CALML4Q96GE6 196 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 ANKEF1Q9NU02 776 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 ZDHHC7Q9NXF8 308 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 TMEM63CQ9P1W3 806 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 FNIP2Q9P278 1114 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 CACNG4Q9UBN1 327 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 KIAA1024Q9UPX6 916 aa15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 PTPRZ1P23471 2315 aaPredicted RBP15.39■□□□□ 0.05
SPTLC2-202ENST00000554365 A0A087WWV3 80 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 DCNP07585 359 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 SLFN14P0C7P3 912 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 GLRA2P23416 452 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 ARL2P36404 184 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 STAT6P42226 847 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 CREMQ03060 361 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 GRIK3Q13003 919 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 SKOR2Q2VWA4 1001 aaPredicted RBP15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 LILRA6Q6PI73 481 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 MAEAQ7L5Y9 396 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 IQUBQ8NA54 791 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 GSTCDQ8NEC7 633 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 HASPINQ8TF76 798 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 POLR3FQ9H1D9 316 aaPredicted RBP15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 CLSTN2Q9H4D0 955 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 STK17AQ9UEE5 414 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 USP25Q9UHP3 1055 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 R4GN57 208 aa15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 TDRD15B5MCY1 1934 aaKnown RBP15.38■□□□□ 0.05
SPTLC2-202ENST00000554365 VPS13AQ96RL7 3174 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 LRRIQ4A6NIV6 560 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 E9PMD0 336 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 ZMYND10O75800 440 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 CEP57Q86XR8 500 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 GRAMD1CQ8IYS0 662 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 RAD54LQ92698 747 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 PAAF1Q9BRP4 392 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 PYM1Q9BRP8 204 aaKnown RBP15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 NFKBIZQ9BYH8 718 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 ARHGEF3Q9NR81 526 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 SIT1Q9Y3P8 196 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 SF3B1O75533 1304 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPTLC2-202ENST00000554365 A0A1B0GUA9 196 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 CASTOR2A6NHX0 329 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 ANHXE9PGG2 379 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 C1RP00736 705 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 FSHRP23945 695 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 RARRES1P49788 294 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 HTR4Q13639 388 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 MCM6Q14566 821 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 RTP2Q5QGT7 225 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 CAVIN1Q6NZI2 390 aaKnown RBP15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 DCLRE1AQ6PJP8 1040 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 ERMP1Q7Z2K6 904 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 GRASPQ7Z6J2 395 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 GPR65Q8IYL9 337 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 KCTD17Q8N5Z5 321 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 RASSF8Q8NHQ8 419 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 PAGE5Q96GU1 130 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 CDK5RAP3Q96JB5 506 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 GPRC5CQ9NQ84 441 aa15.36■□□□□ 0.05
SPTLC2-202ENST00000554365 RIF1Q5UIP0 2472 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 PAPLNO95428 1278 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 PRR29P0C7W0 189 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 NTHL1P78549 312 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms