RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 EPCAMP16422 314 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 CLCN4P51793 760 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 AMPD3Q01432 767 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 ZP2Q05996 745 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 ELAVL2Q12926 359 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 FAM171A1Q5VUB5 890 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 GPR65Q8IYL9 337 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 POP1Q99575 1024 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 RXFP1Q9HBX9 757 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.633e-6■□□□□ 9.1
HNRNPC-208ENST00000553753 PANK4Q9NVE7 773 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 ATP6V1DQ9Y5K8 247 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 TMEM189-UBE2V1I3L0A0 370 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 OGTO15294 1046 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 FAM189A1O60320 539 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 PPP1R37O75864 691 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CXCL8P10145 99 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 TNFSF9P41273 254 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 KRT85P78386 507 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 ITIH3Q06033 890 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CBX2Q14781 532 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 RTP2Q5QGT7 225 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 RESP18Q5W5W9 173 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SLFN12LQ6IEE8 588 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CES5AQ6NT32 575 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SLC39A4Q6P5W5 647 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CCDC65Q8IXS2 484 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 RIN2Q8WYP3 895 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SUSD6Q92537 303 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 MSTO1Q9BUK6 570 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 APOL5Q9BWW9 433 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 STRA6Q9BX79 667 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 TRIM9Q9C026 710 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 TTC26A0AVF1 554 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 ANKRD63C9JTQ0 380 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 TRAPPC3O43617 180 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 GCNT3O95395 438 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 IGFBP6P24592 240 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 RPL9P32969 192 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 CREMQ03060 361 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 KCNA1Q09470 495 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 FBXL18Q96ME1 805 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 PHF7Q9BWX1 381 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 RPF1Q9H9Y2 349 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 FNIP2Q9P278 1114 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 EXOC7Q9UPT5 735 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 STYXL1Q9Y6J8 313 aa11.13□□□□□ -0.63
HNRNPC-208ENST00000553753 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 TISP43B9A030 160 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 PODXLO00592 558 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 GLUD1P00367 558 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 CASP5P51878 434 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 ALCAMQ13740 583 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 ENOX2Q16206 610 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 CD300LGQ6UXG3 332 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 C12orf76Q8N812 135 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 LNX1Q8TBB1 728 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 ACCSQ96QU6 501 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 PYM1Q9BRP8 204 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 MAGEF1Q9HAY2 307 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
HNRNPC-208ENST00000553753 LACTBL1A8MY62 500 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 C1RP00736 705 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ADRB2P07550 413 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 MYBP10242 640 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 RPL17P18621 184 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 FGFR3P22607 806 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ADSSP30520 456 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ACOT2P49753 483 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 SPAG1Q07617 926 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 POSTNQ15063 836 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms