RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TNNC2P02585 160 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 SOD2P04179 222 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 TRIM21P19474 475 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 OSTNP61366 133 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 LRRC63Q05C16 580 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 DUOXA2Q1HG44 320 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 SLC10A6Q3KNW5 377 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 BRSK2Q8IWQ3 736 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 SCFD1Q8WVM8 642 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 MYLIPQ8WY64 445 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 ZNF560Q96MR9 790 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 CERS4Q9HA82 394 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 RBAKQ9NYW8 714 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 HSPBP1Q9NZL4 362 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 KLK14Q9P0G3 267 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 MAFFQ9ULX9 164 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 CITO14578 2027 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SYN3O14994 580 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 CETN3O15182 167 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ADH1AP07327 375 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 CXCL8P10145 99 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 CTSAP10619 480 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 KRT13P13646 458 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 LRPAP1P30533 357 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SLC11A1P49279 550 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 GATMP50440 423 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 STK4Q13043 487 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ANKS3Q6ZW76 656 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ZNF280BQ86YH2 543 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 MRPL43Q8N983 215 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 GSTCDQ8NEC7 633 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 SPATA18Q8TC71 538 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 FBXL18Q96ME1 805 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 MKNK1Q9BUB5 465 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 TLE6Q9H808 572 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 FNIP2Q9P278 1114 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 PCDHA5Q9Y5H7 936 aa11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-208ENST00000552890 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 MEIS3P2A8K0S8 358 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 LACTBL1A8MY62 500 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 ANKRD63C9JTQ0 380 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 PTGESO14684 152 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 IKBKBO14920 756 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 GRM6O15303 877 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 FAM189A1O60320 539 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 DDHD2O94830 711 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 CXCL14O95715 111 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 GNA14O95837 355 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 EDN1P05305 212 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 ADSSP30520 456 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 GLUD2P49448 558 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 ACOT2P49753 483 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 CASP5P51878 434 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 FKBP3Q00688 224 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 PNOCQ13519 176 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 UPP1Q16831 310 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 FUT10Q6P4F1 479 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 SLC39A4Q6P5W5 647 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 WDR49Q8IV35 697 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 GRAMD1CQ8IYS0 662 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 LRRC52Q8N7C0 313 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 HLA-CQ95604 372 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 METTL14Q9HCE5 456 aaKnown RBP11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 PRG3Q9Y2Y8 225 aaPredicted RBP11.12□□□□□ -0.63
TRAFD1-208ENST00000552890 TDRD15B5MCY1 1934 aaKnown RBP11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 PODXLO00592 558 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 FSCN2O14926 492 aa11.11□□□□□ -0.63
TRAFD1-208ENST00000552890 LETM1O95202 739 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms