RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OGTO15294 1046 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 PPP1R37O75864 691 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 EPCAMP16422 314 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 SSTR3P32745 418 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 ALCAMQ13740 583 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 KIAA0319Q5VV43 1072 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 RESP18Q5W5W9 173 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 SLC39A4Q6P5W5 647 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 SYCE2Q6PIF2 218 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 CCDC65Q8IXS2 484 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 B3GALT6Q96L58 329 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 MSTO1Q9BUK6 570 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 GOLGA2P5Q9HBQ8 144 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 PANK4Q9NVE7 773 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 TEX28O15482 410 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 MEFVO15553 781 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 FAM189A1O60320 539 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 B3GAT3O94766 335 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 GCNT3O95395 438 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 CLCN4P51793 760 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 CLCNKBP51801 687 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 AMPD3Q01432 767 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 PPP2R3AQ06190 1150 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 SOX4Q06945 474 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 UPP1Q16831 310 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 SLC10A6Q3KNW5 377 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 ELMSAN1Q6PJG2 1045 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 GJD3Q8N144 294 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 RIN2Q8WYP3 895 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 SUSD6Q92537 303 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 STAMQ92783 540 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 SPATA32Q96LK8 384 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 FBXL18Q96ME1 805 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 TTPALQ9BTX7 342 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 APOL5Q9BWW9 433 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 TRIM9Q9C026 710 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 S1PR5Q9H228 398 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 PLEKHA5Q9HAU0 1116 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 RXFP1Q9HBX9 757 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 TBC1D7Q9P0N9 293 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 EXOC7Q9UPT5 735 aa18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-208ENST00000550102 SPDYE4A6NLX3 237 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 POLR2DO15514 142 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 GLUD1P00367 558 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 TNFSF9P41273 254 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 ASIC1P78348 528 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 ITIH3Q06033 890 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 CBX2Q14781 532 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 RTP2Q5QGT7 225 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 L1TD1Q5T7N2 865 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 FAM171A1Q5VUB5 890 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 SLFN12LQ6IEE8 588 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 CES5AQ6NT32 575 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 DCLRE1AQ6PJP8 1040 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 LEO1Q8WVC0 666 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 ACCSQ96QU6 501 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 STRA6Q9BX79 667 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 SFXN1Q9H9B4 322 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 FNIP2Q9P278 1114 aa18.78■□□□□ 0.6
CHMP1A-208ENST00000550102 TTC26A0AVF1 554 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 PODXLO00592 558 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 TRAPPC3O43617 180 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 RPL9P32969 192 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 ENOX2Q16206 610 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 ZBTB41Q5SVQ8 909 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 RARS2Q5T160 578 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 CNNM4Q6P4Q7 775 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 PIK3R5Q8WYR1 880 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 C18orf25Q96B23 403 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 RPF1Q9H9Y2 349 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 CD320Q9NPF0 282 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 DPP7Q9UHL4 492 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 PCDHB13Q9Y5F0 798 aa18.77■□□□□ 0.6
CHMP1A-208ENST00000550102 TSC2P49815 1807 aa18.77■□□□□ 0.59
CHMP1A-208ENST00000550102 C19orf67A6NJJ6 358 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 TISP43B9A030 160 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 ANKRD63C9JTQ0 380 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 XPOTO43592 962 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 MYBP10242 640 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 CASP5P51878 434 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 PSMD5Q16401 504 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 ADALQ6DHV7 355 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 PRSS55Q6UWB4 352 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 STXBP4Q6ZWJ1 553 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 CEP57Q86XR8 500 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 C3orf58Q8NDZ4 430 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 POMGNT1Q8WZA1 660 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 KIF12Q96FN5 646 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 RIPOR3Q96MK2 946 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 NECTIN4Q96NY8 510 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 TSPAN18Q96SJ8 248 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms