RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 C2CD2Q9Y426 696 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 ZNF233A6NK53 670 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 CLIC2O15247 247 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 DNAJB1P25685 340 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 MYBPC2Q14324 1141 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 DCLRE1AQ6PJP8 1040 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 NT5DC4Q86YG4 428 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 SLC9A9Q8IVB4 645 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 XXYLT1Q8NBI6 393 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 BCL7CQ8WUZ0 217 aaPredicted RBP18.26■□□□□ 0.51
CCDC38-203ENST00000546803 RBAKQ9NYW8 714 aaPredicted RBP18.26■□□□□ 0.51
CCDC38-203ENST00000546803 MAN1B1Q9UKM7 699 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 TRAF3IP3Q9Y228 551 aa18.26■□□□□ 0.51
CCDC38-203ENST00000546803 GOLGA8IPA6NC78 632 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 GOLGA8JA6NMD2 632 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 TMEM189-UBE2V1I3L0A0 370 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 CALUO43852 315 aaPredicted RBP18.25■□□□□ 0.51
CCDC38-203ENST00000546803 TADA2AO75478 443 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 PPP1R2P41236 205 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 CYP2J2P51589 502 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 SOX4Q06945 474 aaPredicted RBP18.25■□□□□ 0.51
CCDC38-203ENST00000546803 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 SURF1Q15526 300 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 NFIL3Q16649 462 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 UPP1Q16831 310 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 VPS52Q8N1B4 723 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 BEST2Q8NFU1 509 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 MICAL1Q8TDZ2 1067 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 PPP2R3CQ969Q6 453 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 C18orf25Q96B23 403 aaPredicted RBP18.25■□□□□ 0.51
CCDC38-203ENST00000546803 PAAF1Q9BRP4 392 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
CCDC38-203ENST00000546803 DMAC2Q9NW81 257 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 ADAM28Q9UKQ2 775 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
CCDC38-203ENST00000546803 FSCN2O14926 492 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 B3GAT3O94766 335 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 LRPAP1P30533 357 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 PRCPP42785 496 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 ERVFC1P60507 584 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 SPAG1Q07617 926 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 ELAVL2Q12926 359 aaKnown RBP18.24■□□□□ 0.51
CCDC38-203ENST00000546803 STIM1Q13586 685 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 CAMK4Q16566 473 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 SPATA1Q5VX52 437 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 TMC7Q7Z402 723 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 CBWD2Q8IUF1 395 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 TRIML1Q8N9V2 468 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 ZSWIM2Q8NEG5 633 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 MAFAQ8NHW3 353 aaPredicted RBP18.24■□□□□ 0.51
CCDC38-203ENST00000546803 NOC3LQ8WTT2 800 aaKnown RBP18.24■□□□□ 0.51
CCDC38-203ENST00000546803 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 ENTPD7Q9NQZ7 604 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 KIAA1468Q9P260 1216 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 CACNG4Q9UBN1 327 aa18.24■□□□□ 0.51
CCDC38-203ENST00000546803 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCDC38-203ENST00000546803 RALGAPA2Q2PPJ7 1873 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 PODXLO00592 558 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 EXOC3O60645 756 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 KIF4AO95239 1232 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 EFEMP2O95967 443 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 NR3C1P04150 777 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 SOD2P04179 222 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 NFICP08651 508 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 CTSAP10619 480 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 IRS1P35568 1242 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 CLCNKBP51801 687 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 MORC3Q14149 939 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
CCDC38-203ENST00000546803 SNRNP35Q16560 246 aaKnown RBP18.23■□□□□ 0.51
CCDC38-203ENST00000546803 FUT10Q6P4F1 479 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 SMYD4Q8IYR2 804 aaPredicted RBP18.23■□□□□ 0.51
CCDC38-203ENST00000546803 RNF168Q8IYW5 571 aaPredicted RBP18.23■□□□□ 0.51
CCDC38-203ENST00000546803 ADSSL1Q8N142 457 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 MICALL1Q8N3F8 863 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 RABGGTAQ92696 567 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 HERC2P3Q9BVR0 1158 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 NUP62CLQ9H1M0 184 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 SSX2IPQ9Y2D8 614 aa18.23■□□□□ 0.51
CCDC38-203ENST00000546803 F8W810 466 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 TRAPPC3O43617 180 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 MBD3O95983 291 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
CCDC38-203ENST00000546803 EDRF1Q3B7T1 1238 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 GPR65Q8IYL9 337 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 MRPL43Q8N983 215 aaKnown RBP18.22■□□□□ 0.51
CCDC38-203ENST00000546803 CACTINQ8WUQ7 758 aaKnown RBP18.22■□□□□ 0.51
CCDC38-203ENST00000546803 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
CCDC38-203ENST00000546803 VN1R3Q9BXE9 311 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 IRAK3Q9Y616 596 aa18.22■□□□□ 0.51
CCDC38-203ENST00000546803 PSMA7O14818 248 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 NCK2O43639 380 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 CXCL14O95715 111 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 PAX3P23760 479 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms