RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
RTN3-214ENST00000545432 VWA8A3KMH1 1905 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 CASTOR2A6NHX0 329 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 TM4SF5O14894 197 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 FOXD2O60548 495 aaPredicted RBP16.3■□□□□ 0.2
RTN3-214ENST00000545432 PTPN2P17706 415 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 RARRES1P49788 294 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 CCR3P51677 355 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 AIFM3Q96NN9 605 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
RTN3-214ENST00000545432 SEMA4GQ9NTN9 838 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 PRMT7Q9NVM4 692 aaPredicted RBP16.3■□□□□ 0.2
RTN3-214ENST00000545432 RAB23Q9ULC3 237 aa16.3■□□□□ 0.2
RTN3-214ENST00000545432 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 NRG2O14511 850 aaPredicted RBP16.29■□□□□ 0.2
RTN3-214ENST00000545432 HRO43593 1189 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 CHRNB1P11230 501 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
RTN3-214ENST00000545432 PSMA5P28066 241 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 CNR2P34972 360 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 GAS6Q14393 721 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 PPP2R5DQ14738 602 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 ZNF461Q8TAF7 563 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 ING5Q8WYH8 240 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 TRPV4Q9HBA0 871 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 ZNF334Q9HCZ1 680 aaPredicted RBP16.29■□□□□ 0.2
RTN3-214ENST00000545432 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 CDY1Q9Y6F8 540 aa16.29■□□□□ 0.2
RTN3-214ENST00000545432 ARNTLO00327 626 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 CCNT1O60563 726 aaKnown RBP16.28■□□□□ 0.2
RTN3-214ENST00000545432 CEBPBP17676 345 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 PMLP29590 882 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 HOXA6P31267 233 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 LIMK1P53667 647 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 SHC2P98077 582 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 FAM78AQ5JUQ0 283 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 NCAPH2Q6IBW4 605 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 PRR23CQ6ZRP0 262 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 ANKS3Q6ZW76 656 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 SPEM1Q8N4L4 309 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 DDX1Q92499 740 aaKnown RBP16.28■□□□□ 0.2
RTN3-214ENST00000545432 IRF7Q92985 503 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
RTN3-214ENST00000545432 ASB16Q96NS5 453 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 PPP1R10Q96QC0 940 aaKnown RBP16.28■□□□□ 0.2
RTN3-214ENST00000545432 TRMT61BQ9BVS5 477 aaKnown RBP16.28■□□□□ 0.2
RTN3-214ENST00000545432 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
RTN3-214ENST00000545432 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.27■□□□□ 0.2
RTN3-214ENST00000545432 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 N4BP3O15049 544 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 CDC45O75419 566 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 RECQL4O94761 1208 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 CXCL12P48061 93 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
RTN3-214ENST00000545432 UPP1Q16831 310 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 TCEAL8Q8IYN2 117 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 FAM3CQ92520 227 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 POLR3FQ9H1D9 316 aaPredicted RBP16.27■□□□□ 0.2
RTN3-214ENST00000545432 ZSWIM6Q9HCJ5 1215 aa16.27■□□□□ 0.2
RTN3-214ENST00000545432 COL4A2P08572 1712 aa16.27■□□□□ 0.19
RTN3-214ENST00000545432 K7ESF4 209 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 ACKR2O00590 384 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 ZNF197O14709 1029 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 MOSPD3O75425 235 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 B3GAT3O94766 335 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
RTN3-214ENST00000545432 ATF2P15336 505 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 PSMC3P17980 439 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 CCR2P41597 374 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 EPHA5P54756 1037 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 PTGDRQ13258 359 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 EARS2Q5JPH6 523 aaKnown RBP16.26■□□□□ 0.19
RTN3-214ENST00000545432 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 TCEAL4Q96EI5 215 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 UROC1Q96N76 676 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 NDRG2Q9UN36 371 aaKnown RBP16.26■□□□□ 0.19
RTN3-214ENST00000545432 ARID2Q68CP9 1835 aa16.26■□□□□ 0.19
RTN3-214ENST00000545432 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 WDR27A2RRH5 827 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 GDF9O60383 454 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 TKTP29401 623 aaKnown RBP16.25■□□□□ 0.19
RTN3-214ENST00000545432 SATB1Q01826 763 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 ROR1Q01973 937 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 LPAL2Q16609 132 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 VITQ6UXI7 678 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 ALKAL1Q6UXT8 129 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 MFSD6LQ8IWD5 586 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
RTN3-214ENST00000545432 SMARCD2Q92925 531 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms