RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CTNND2Q9UQB3 1225 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 GOLGA8IPA6NC78 632 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 GOLGA8JA6NMD2 632 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 IKBKBO14920 756 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 STX10O60499 249 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 POMCP01189 267 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 KRT13P13646 458 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 BMPR1AP36894 532 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 PMS1P54277 932 aaKnown RBP12.74□□□□□ -0.37
SNHG1-221ENST00000544983 ERVK-21P61565 698 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 CLDN10P78369 228 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 DUOXA2Q1HG44 320 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
SNHG1-221ENST00000544983 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
SNHG1-221ENST00000544983 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 COLGALT2Q8IYK4 626 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 FAM186BQ8IYM0 893 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 CWH43Q9H720 699 aa12.74□□□□□ -0.37
SNHG1-221ENST00000544983 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
SNHG1-221ENST00000544983 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
SNHG1-221ENST00000544983 TRIP11Q15643 1979 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ZC3H11AO75152 810 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 AKAP3O75969 853 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 PBX2P40425 430 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 GATMP50440 423 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 AFF1P51825 1210 aaKnown RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 BCAR1P56945 870 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 TAP1Q03518 808 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 NAB2Q15742 525 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 SPATA1Q5VX52 437 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 JADE1Q6IE81 842 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 RDH13Q8NBN7 331 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ENOX1Q8TC92 643 aaKnown RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ZMAT2Q96NC0 199 aaKnown RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 BPIFA3Q9BQP9 254 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 C11orf84Q9BUA3 381 aaPredicted RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 PDE11AQ9HCR9 933 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 SPG21Q9NZD8 308 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
SNHG1-221ENST00000544983 FAN1Q9Y2M0 1017 aa12.73□□□□□ -0.37
SNHG1-221ENST00000544983 SYCE3A1L190 88 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 LCHNA4D1U4 455 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 TRIM49BA6NDI0 452 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 TMEM189-UBE2V1I3L0A0 370 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-221ENST00000544983 DDHD2O94830 711 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 TNNC2P02585 160 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 GALTP07902 379 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 MYOGP15173 224 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 LRPAP1P30533 357 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 GTF2H1P32780 548 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 CASP4P49662 377 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 VAMP7P51809 220 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
SNHG1-221ENST00000544983 KRT17Q04695 432 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 UBE3AQ05086 875 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 BFSP1Q12934 665 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 ZNF280BQ86YH2 543 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 COLGALT1Q8NBJ5 622 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 ZSWIM2Q8NEG5 633 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 CGRRF1Q99675 332 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 THAP9Q9H5L6 903 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 ITGA11Q9UKX5 1188 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
SNHG1-221ENST00000544983 LAMA3Q16787 3333 aa12.72□□□□□ -0.37
SNHG1-221ENST00000544983 ARHGEF37A1IGU5 675 aa12.71□□□□□ -0.37
SNHG1-221ENST00000544983 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
SNHG1-221ENST00000544983 TRAPPC3O43617 180 aa12.71□□□□□ -0.37
SNHG1-221ENST00000544983 DLATP10515 647 aaKnown RBP12.71□□□□□ -0.37
SNHG1-221ENST00000544983 TNNI1P19237 187 aa12.71□□□□□ -0.37
SNHG1-221ENST00000544983 CTNNB1P35222 781 aa12.71□□□□□ -0.37
SNHG1-221ENST00000544983 PNPLA4P41247 253 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms