RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 HSP90AA2PQ14568 343 aaPredicted RBP20.81■□□□□ 0.92
DDX55-211ENST00000544429 UPP1Q16831 310 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 CD300LGQ6UXG3 332 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 CD302Q8IX05 232 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 UROC1Q96N76 676 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 GSDMAQ96QA5 445 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 COLEC11Q9BWP8 271 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 CGNQ9P2M7 1197 aaKnown RBP20.81■□□□□ 0.92
DDX55-211ENST00000544429 PCDHGC5Q9Y5F6 944 aa20.81■□□□□ 0.92
DDX55-211ENST00000544429 EXTL3O43909 919 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 KINO60870 393 aaKnown RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 KIF4AO95239 1232 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 LDHAP00338 332 aaKnown RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 CTSAP10619 480 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 IGFBP6P24592 240 aaPredicted RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 TCEAL5Q5H9L2 206 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 ARMCX5Q6P1M9 558 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 NELFCDQ8IXH7 590 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 VPS52Q8N1B4 723 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 RABGGTAQ92696 567 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 C18orf25Q96B23 403 aaPredicted RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 SAAL1Q96ER3 474 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 TCF25Q9BQ70 676 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 ASB7Q9H672 318 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 GOLGA2P5Q9HBQ8 144 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 NGRNQ9NPE2 291 aaKnown RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 CHST7Q9NS84 486 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 ADAM28Q9UKQ2 775 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 DERAQ9Y315 318 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 PCDHA5Q9Y5H7 936 aa20.8■□□□□ 0.92
DDX55-211ENST00000544429 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.8■□□□□ 0.92
DDX55-211ENST00000544429 LILRB3O75022 631 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 SOD2P04179 222 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 CYP3A5P20815 502 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 CLCNKBP51801 687 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 HYAL1Q12794 435 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 CCDC85BQ15834 202 aaPredicted RBP20.79■□□□□ 0.92
DDX55-211ENST00000544429 COBLL1Q53SF7 1204 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 ADGRD2Q7Z7M1 963 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 BRSK2Q8IWQ3 736 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 MRPL43Q8N983 215 aaKnown RBP20.79■□□□□ 0.92
DDX55-211ENST00000544429 C3orf58Q8NDZ4 430 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 CCDC47Q96A33 483 aaKnown RBP20.79■□□□□ 0.92
DDX55-211ENST00000544429 DDX27Q96GQ7 796 aaKnown RBP20.79■□□□□ 0.92
DDX55-211ENST00000544429 FAM213AQ9BRX8 229 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 GPR62Q9BZJ7 368 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 LMBRD1Q9NUN5 540 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 HSPBP1Q9NZL4 362 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 C2CD2Q9Y426 696 aa20.79■□□□□ 0.92
DDX55-211ENST00000544429 LRPAP1P30533 357 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 RPL9P32969 192 aaKnown RBP20.78■□□□□ 0.92
DDX55-211ENST00000544429 WNT7BP56706 349 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 CTC1Q2NKJ3 1217 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 SPATA1Q5VX52 437 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 FUT10Q6P4F1 479 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 DCLRE1AQ6PJP8 1040 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 HS2ST1Q7LGA3 356 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 TAS1R1Q7RTX1 841 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 GPR65Q8IYL9 337 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 GPD1LQ8N335 351 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 MICALL1Q8N3F8 863 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 GUF1Q8N442 669 aaKnown RBP20.78■□□□□ 0.92
DDX55-211ENST00000544429 HERC2P3Q9BVR0 1158 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 PCIF1Q9H4Z3 704 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 DMAC2Q9NW81 257 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 TUBGCP4Q9UGJ1 667 aa20.78■□□□□ 0.92
DDX55-211ENST00000544429 HOOK1Q9UJC3 728 aaKnown RBP20.78■□□□□ 0.92
DDX55-211ENST00000544429 C2orf71A6NGG8 1288 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 HIDE1A8MVS5 230 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 PDXKO00764 312 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 IL18RAPO95256 599 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 NFICP08651 508 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 SPAG1Q07617 926 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 KCNC3Q14003 757 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 SMC1AQ14683 1233 aaKnown RBP20.77■□□□□ 0.92
DDX55-211ENST00000544429 JADE1Q6IE81 842 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 SLC9A9Q8IVB4 645 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 GOLGA5Q8TBA6 731 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 ERCC4Q92889 916 aaPredicted RBP20.77■□□□□ 0.92
DDX55-211ENST00000544429 KIF12Q96FN5 646 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 KIAA1586Q9HCI6 787 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 RMND1Q9NWS8 449 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 UBQLN1Q9UMX0 589 aaKnown RBP20.77■□□□□ 0.92
DDX55-211ENST00000544429 TRAF3IP3Q9Y228 551 aa20.77■□□□□ 0.92
DDX55-211ENST00000544429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.76■□□□□ 0.91
DDX55-211ENST00000544429 GOLGA8IPA6NC78 632 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 GOLGA8JA6NMD2 632 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 SMC2O95347 1197 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 PTPN14Q15678 1187 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 NFIL3Q16649 462 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 DUSP6Q16828 381 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 ZNF658Q5TYW1 1059 aaPredicted RBP20.76■□□□□ 0.91
DDX55-211ENST00000544429 KIAA0319Q5VV43 1072 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 PLPP4Q5VZY2 271 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 TMC7Q7Z402 723 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 NT5DC4Q86YG4 428 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 CBWD2Q8IUF1 395 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 EFCAB13Q8IY85 973 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 TMEM130Q8N3G9 435 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 SMARCE1Q969G3 411 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms