RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 KCND2Q9NZV8 630 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 MORF4L1Q9UBU8 362 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 APEX2Q9UBZ4 518 aa16.08■□□□□ 0.16
CHFR-223ENST00000544268 DAPK3O43293 454 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 ZNF862O60290 1169 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 PAK2Q13177 524 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 UAP1Q16222 522 aaPredicted RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 ABHD15Q6UXT9 468 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 SLFN11Q7Z7L1 901 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 CCDC60Q8IWA6 550 aaPredicted RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 P3H4Q92791 437 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 PARK7Q99497 189 aaKnown RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 STRA6Q9BX79 667 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 UBE2TQ9NPD8 197 aaPredicted RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 FBXL5Q9UKA1 691 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 BACH1O14867 736 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 SLC16A4O15374 487 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 FGGP02679 453 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 PSAPP07602 524 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 FERP16591 822 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 MREGQ8N565 214 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 ARFGAP2Q8N6H7 521 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 PAIP2Q9BPZ3 127 aaKnown RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■■■□ 25.1
CHFR-223ENST00000544268 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
CHFR-223ENST00000544268 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
CHFR-223ENST00000544268 GMNCA6NCL1 334 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 TMEM110-MUSTN1A8MSY1 372 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
CHFR-223ENST00000544268 SCTRP47872 440 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 TNNC1P63316 161 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 CDCA2Q69YH5 1023 aaPredicted RBP16.06■□□□□ 0.16
CHFR-223ENST00000544268 ANO5Q75V66 913 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 ALG3Q92685 438 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 ETAA1Q9NY74 926 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 USP20Q9Y2K6 914 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHFR-223ENST00000544268 ARIH2O95376 493 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 ADORA2AP29274 412 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 SPDL1Q96EA4 605 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 SAAL1Q96ER3 474 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 BTBD6Q96KE9 485 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 MPHOSPH6Q99547 160 aaKnown RBP16.06■□□□□ 0.16
CHFR-223ENST00000544268 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
CHFR-223ENST00000544268 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 CAND2O75155 1236 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 SKAP2O75563 359 aaPredicted RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 FARP2O94887 1054 aaPredicted RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 STBD1O95210 358 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 ADRB2P07550 413 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 PEX3P56589 373 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 XKR9Q5GH70 373 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 MAATS1Q7Z4T9 603 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 VPS36Q86VN1 386 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 GLG1Q92896 1179 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 EBF2Q9HAK2 575 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 HSD17B3P37058 310 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 SPRED3Q2MJR0 410 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 UBAP2Q5T6F2 1119 aaKnown RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 RGMBQ6NW40 437 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 CBWD2Q8IUF1 395 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 KRT35Q92764 455 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 PBKQ96KB5 322 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 PPANQ9NQ55 473 aaKnown RBP16.05■□□□□ 0.16
CHFR-223ENST00000544268 ANKEF1Q9NU02 776 aa16.05■□□□□ 0.16
CHFR-223ENST00000544268 ANKRD63C9JTQ0 380 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 SGPL1O95470 568 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 ATP6V1G2O95670 118 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 TGFB3P10600 412 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 GHRP10912 638 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 RWDD2BP57060 319 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 FAM110CQ1W6H9 321 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 CCDC26Q8TAB7 109 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 MORC4Q8TE76 937 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 CCDC127Q96BQ5 260 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 PCDHB18PQ96TA0 734 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms