RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PMM2O15305 246 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 PPP1R37O75864 691 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 EOMESO95936 686 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 KRT13P13646 458 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 NCKAP1LP55160 1127 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 MCCD1P59942 119 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 KRT83P78385 493 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 CCZ1BP86790 482 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 CCZ1P86791 482 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 ARMCX5Q6P1M9 558 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 HAUS6Q7Z4H7 955 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 TC2NQ8N9U0 490 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 PRIMPOLQ96LW4 560 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 PPP1R16BQ96T49 567 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 INO80BQ9C086 356 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 KCNF1Q9H3M0 494 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 KMT5AQ9NQR1 393 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 INTS13Q9NVM9 706 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 SUCLA2Q9P2R7 463 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 LZTS1Q9Y250 596 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 NPHP3-ACAD11A0A0J9YXS1 232 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 K7ENM7 598 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 TEX33O43247 280 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 ZNF623O75123 536 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 AFPP02771 609 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 ATF7P17544 494 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 GARTP22102 1010 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 KCNA5P22460 613 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 DNAJB1P25685 340 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 HNRNPH3P31942 346 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 KRT9P35527 623 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 LTBRP36941 435 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 NAMPTP43490 491 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 GATMP50440 423 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 PLCB3Q01970 1234 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 POU5F1BQ06416 359 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 HYAL1Q12794 435 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 STRN3Q13033 797 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 PDE12Q6L8Q7 609 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 CASD1Q96PB1 797 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 DNAJC7Q99615 494 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 TMEM134Q9H6X4 195 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 CWH43Q9H720 699 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 ALG13Q9NP73 1137 aaKnown RBP12.46□□□□□ -0.41
COPS7A-217ENST00000543537 PLCB1Q9NQ66 1216 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 PCDHB12Q9Y5F1 795 aa12.46□□□□□ -0.41
COPS7A-217ENST00000543537 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.42
COPS7A-217ENST00000543537 A0A087WZ62 844 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 CARNS1A5YM72 827 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 CCDC175P0C221 793 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 FGFR1P11362 822 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 LAG3P18627 525 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 GTF2H1P32780 548 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 NPEPPSP55786 919 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 POU5F1Q01860 360 aaKnown RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 MAPK7Q13164 816 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 TUBB2AQ13885 445 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 TFDP1Q14186 410 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 SYCP1Q15431 976 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PTPN14Q15678 1187 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 HSP90AA4PQ58FG1 418 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 MIIPQ5JXC2 388 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PLA2G4FQ68DD2 849 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 FAM186BQ8IYM0 893 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 XXYLT1Q8NBI6 393 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 POF1BQ8WVV4 589 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PSPC1Q8WXF1 523 aaKnown RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 PPP2R3CQ969Q6 453 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 NECAB3Q96P71 396 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 FIZ1Q96SL8 496 aa12.45□□□□□ -0.42
COPS7A-217ENST00000543537 FDXACB1Q9BRP7 624 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-217ENST00000543537 TUBB2BQ9BVA1 445 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms