RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	FAM117B	Q6P1L5	589 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	RPUSD2	Q8IZ73	545 aa	Known RBP	13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	TMC2	Q8TDI7	906 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	MORF4L1	Q9UBU8	362 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	STRIP2	Q9ULQ0	834 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	ADGRG1	Q9Y653	693 aa		13.2	□□□□□ -0.3
ABCB8-222	ENST00000542328	MAF	O75444	373 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	CALB1	P05937	261 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SMIM10L2A	P0DMW4	78 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SMIM10L2B	P0DMW5	78 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SARS	P49591	514 aa	Known RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	C2orf54	Q08AI8	447 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	HSDL1	Q3SXM5	330 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NME8	Q8N427	588 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	TAB3	Q8N5C8	712 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	GPR20	Q99678	358 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	PARD6B	Q9BYG5	372 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SEMA6B	Q9H3T3	888 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SPATA31C1	P0DKV0	1188 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	MCF2	P10911	925 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	STIL	Q15468	1287 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NPY5R	Q15761	445 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	HYI	Q5T013	277 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	GRK7	Q8WTQ7	553 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NCAPG	Q9BPX3	1015 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	ZNF536	O15090	1300 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	IGLV3-22	A0A075B6J6	115 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	CPB1	P15086	417 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NOP14	P78316	857 aa	Known RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NR1I3	Q14994	352 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	SETDB1	Q15047	1291 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	NT5DC1	Q5TFE4	455 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	KIAA0895	Q8NCT3	520 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	TXNRD2	Q9NNW7	524 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	PTPN22	Q9Y2R2	807 aa		13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.19	□□□□□ -0.3
ABCB8-222	ENST00000542328	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328		M0QYV0	167 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CCNE2	O96020	404 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	UCHL3	P15374	230 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	MMTAG2	Q9BU76	263 aa	Known RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	TRIM7	Q9C029	511 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	PPAN	Q9NQ55	473 aa	Known RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	TMEM39A	Q9NV64	488 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	RNF14	Q9UBS8	474 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	ITIH6	Q6UXX5	1313 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CCDC151	A5D8V7	595 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	GPR25	O00155	361 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	HGS	O14964	777 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	GHR	P10912	638 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	OR1G1	P47890	313 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	RAB27A	P51159	221 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC35G1	Q2M3R5	365 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CAPN12	Q6ZSI9	719 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CTAGE3P	Q8IX95	158 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	NIF3L1	Q9GZT8	377 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CNOT8	Q9UFF9	292 aa	Known RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	TRAF3IP3	Q9Y228	551 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CSDE1	O75534	798 aa	Known RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	TAF6	P49848	677 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	MTF1	Q14872	753 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CCDC6	Q16204	474 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	SEZ6	Q53EL9	994 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	B4GALNT4	Q76KP1	1039 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CPB2	Q96IY4	423 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	KLK14	Q9P0G3	267 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	COL5A3	P25940	1745 aa	Predicted RBP	13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	SEPT4	O43236	478 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	GTF2H1	P32780	548 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	NOV	P48745	357 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	CASP4	P49662	377 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	ATP1A2	P50993	1020 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	PRKCZ	Q05513	592 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	ITIH3	Q06033	890 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC27A1	Q6PCB7	646 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	PASD1	Q8IV76	773 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	HAUS1	Q96CS2	278 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	HPDL	Q96IR7	371 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	ERGIC2	Q96RQ1	377 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	TMEM134	Q9H6X4	195 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	PLCB1	Q9NQ66	1216 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	LRP5	O75197	1615 aa		13.18	□□□□□ -0.3
ABCB8-222	ENST00000542328	PASK	Q96RG2	1323 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	TYW5	A2RUC4	315 aa	Known RBP	13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	MMP3	P08254	477 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC9A1	P19634	815 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	ALDH3A1	P30838	453 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	MAP4K3	Q8IVH8	894 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	GIMAP7	Q8NHV1	300 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	DEFB118	Q96PH6	123 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	PPP1R12C	Q9BZL4	782 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	LY75	O60449	1722 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	BCOR	Q6W2J9	1755 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	PCSK1	P29120	753 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	GPC5	P78333	572 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	GFPT1	Q06210	699 aa	Predicted RBP	13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	HHAT	Q5VTY9	493 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	SMC6	Q96SB8	1091 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms