RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 GSTCDQ8NEC7 633 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 HNRNPABQ99729 332 aaKnown RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 SLKQ9H2G2 1235 aaPredicted RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 DIAPH3Q9NSV4 1193 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 TBC1D22BQ9NU19 505 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 SLC8A2Q9UPR5 921 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 ABCA7Q8IZY2 2146 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHFR-220ENST00000541817 THADAQ6YHU6 1953 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 PYCARD-AS1I3L0S3 204 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 MEFVO15553 781 aaPredicted RBP10.87□□□□□ -0.67
CHFR-220ENST00000541817 MOSPD3O75425 235 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 STBD1O95210 358 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 CTHP32929 405 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 ADCY7P51828 1080 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 CCINQ13939 588 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 RAB33AQ14088 237 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
CHFR-220ENST00000541817 ELF2Q15723 593 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 UVSSAQ2YD98 709 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 PRR16Q569H4 304 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 PLA2G4FQ68DD2 849 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 MFSD6LQ8IWD5 586 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 YAF2Q8IY57 180 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 GPR65Q8IYL9 337 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 ZSCAN18Q8TBC5 510 aaPredicted RBP10.87□□□□□ -0.67
CHFR-220ENST00000541817 FAM200AQ8TCP9 573 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 SMARCD2Q92925 531 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 TMEM143Q96AN5 459 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 CXCL16Q9H2A7 254 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 NXF3Q9H4D5 531 aaKnown RBP10.87□□□□□ -0.67
CHFR-220ENST00000541817 SLC32A1Q9H598 525 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 CCDC86Q9H6F5 360 aaKnown RBP10.87□□□□□ -0.67
CHFR-220ENST00000541817 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 FSCN3Q9NQT6 498 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 ADAMTS9Q9P2N4 1935 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 PCNX2A6NKB5 2137 aa10.87□□□□□ -0.67
CHFR-220ENST00000541817 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 E7EWF7 191 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 DDAH1O94760 285 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 RHOBTB1O94844 696 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 FOSP01100 380 aaPredicted RBP10.86□□□□□ -0.67
CHFR-220ENST00000541817 LRG1P02750 347 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 CYP21A2P08686 494 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 POU2F2P09086 479 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 MYL4P12829 197 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 CDC42EP1Q00587 391 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 PDZD4Q76G19 769 aaPredicted RBP10.86□□□□□ -0.67
CHFR-220ENST00000541817 RALYLQ86SE5 291 aaKnown RBP10.86□□□□□ -0.67
CHFR-220ENST00000541817 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
CHFR-220ENST00000541817 DEPDC1BQ8WUY9 529 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 SNX21Q969T3 373 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 UNC45AQ9H3U1 944 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 C8orf33Q9H7E9 229 aaPredicted RBP10.86□□□□□ -0.67
CHFR-220ENST00000541817 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 PARP2Q9UGN5 583 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 RAI2Q9Y5P3 530 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 COL4A3BPQ9Y5P4 624 aa10.86□□□□□ -0.67
CHFR-220ENST00000541817 MAFO75444 373 aaPredicted RBP10.85□□□□□ -0.67
CHFR-220ENST00000541817 SEC24AO95486 1093 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
CHFR-220ENST00000541817 GNAQP50148 359 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 ARPP19P56211 112 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 TNK2Q07912 1038 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 TEAD2Q15562 447 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 ZNF605Q86T29 641 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 PNPLA1Q8N8W4 532 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 CNNM3Q8NE01 707 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 PRPF31Q8WWY3 499 aaKnown RBP10.85□□□□□ -0.67
CHFR-220ENST00000541817 PIGKQ92643 395 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 LRRC3BQ96PB8 259 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
CHFR-220ENST00000541817 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 ASXL3Q9C0F0 2248 aa10.85□□□□□ -0.67
CHFR-220ENST00000541817 CELSR3Q9NYQ7 3312 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 FAM221BA6H8Z2 402 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 I3L4J1 428 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 PRRG1O14668 218 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 CHADO15335 359 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 TSPAN1O60635 241 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 AKAP3O75969 853 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 ERLIN2O94905 339 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 NPTXRO95502 500 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms