RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PTENP60484 403 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 TARBP2Q15633 366 aaKnown RBP18.42■□□□□ 0.54
SPIDR-227ENST00000541342 CBWD2Q8IUF1 395 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 ASAP3Q8TDY4 903 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 MORC4Q8TE76 937 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 COG5Q9UP83 839 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 DNM1LO00429 736 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 LRRN2O75325 713 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 CCDC26Q8TAB7 109 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 SEPT1Q8WYJ6 367 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 RFFLQ8WZ73 363 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 TLCD1Q96CP7 247 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 AMFRQ9UKV5 643 aa18.42■□□□□ 0.54
SPIDR-227ENST00000541342 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 MAPK13O15264 365 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 CETPP11597 493 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 STAT1P42224 750 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 CCL15Q16663 113 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 CELF3Q5SZQ8 465 aaKnown RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 CCDC62Q6P9F0 684 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 C3orf20Q8ND61 904 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 GPR20Q99678 358 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 SHBGP04278 402 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 ABCB4P21439 1286 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 DRAP1Q14919 205 aaPredicted RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 SNRNP35Q16560 246 aaKnown RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 DUPD1Q68J44 220 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 ADAT2Q7Z6V5 191 aaKnown RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 ALG3Q92685 438 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 COPS5Q92905 334 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 IFT74Q96LB3 600 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 PDGFCQ9NRA1 345 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 UTP11Q9Y3A2 253 aaKnown RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 TMEM253P0C7T8 217 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 GLRA2P23416 452 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 MCCD1P59942 119 aaPredicted RBP18.41■□□□□ 0.54
SPIDR-227ENST00000541342 PLCB4Q15147 1175 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 KRT71Q3SY84 523 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 MDM1Q8TC05 714 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 GLG1Q92896 1179 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 SEC16BQ96JE7 1060 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 RRAGCQ9HB90 399 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 FAM114A2Q9NRY5 505 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 USP20Q9Y2K6 914 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 ATP8A1Q9Y2Q0 1164 aa18.41■□□□□ 0.54
SPIDR-227ENST00000541342 ARL2P36404 184 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 GCLMP48507 274 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 GTF2A2P52657 109 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 ODF2Q5BJF6 829 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 UBAP2Q5T6F2 1119 aaKnown RBP18.4■□□□□ 0.54
SPIDR-227ENST00000541342 PHLDB3Q6NSJ2 640 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 TATDN2Q93075 761 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 STK33Q9BYT3 514 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 GBA2Q9HCG7 927 aaPredicted RBP18.4■□□□□ 0.54
SPIDR-227ENST00000541342 CAND2O75155 1236 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 FAM160B1Q5W0V3 765 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 AADACL2Q6P093 401 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 FMO2Q99518 471 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 APEX2Q9UBZ4 518 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 DNAJC12Q9UKB3 198 aa18.4■□□□□ 0.54
SPIDR-227ENST00000541342 ZNF211Q13398 564 aaPredicted RBP18.39■□□□□ 0.54
SPIDR-227ENST00000541342 THAP2Q9H0W7 228 aa18.39■□□□□ 0.54
SPIDR-227ENST00000541342 SLC45A1Q9Y2W3 748 aa18.39■□□□□ 0.54
SPIDR-227ENST00000541342 HNRNPDLO14979 420 aaKnown RBP18.39■□□□□ 0.53
SPIDR-227ENST00000541342 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 FBXL18Q96ME1 805 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 MARK3P27448 753 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 DRP2Q13474 957 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 EPC2Q52LR7 807 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 ANKRD20A8PQ5CZ79 823 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 ZDHHC24Q6UX98 284 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
SPIDR-227ENST00000541342 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 CARD9Q9H257 536 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 CD248Q9HCU0 757 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 SLC40A1Q9NP59 571 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 NRBP2Q9NSY0 501 aa18.39■□□□□ 0.53
SPIDR-227ENST00000541342 DRD4P21917 467 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 GSCP56915 257 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-227ENST00000541342 DR1Q01658 176 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 BRDTQ58F21 947 aaPredicted RBP18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ERP44Q9BS26 406 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 TMEM117Q9H0C3 514 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 KLC4Q9NSK0 619 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 LGR5O75473 907 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ZDHHC14Q8IZN3 488 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 POP1Q99575 1024 aaKnown RBP18.38■□□□□ 0.53
SPIDR-227ENST00000541342 NCAPGQ9BPX3 1015 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ADAM7Q9H2U9 754 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ZBTB42B2RXF5 422 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
SPIDR-227ENST00000541342 ADORA2AP29274 412 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 USP8P40818 1118 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 RFC5P40937 340 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 FKBP1BP68106 108 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms