RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 SLC18A3Q16572 532 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 FAM117BQ6P1L5 589 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 TAF2Q6P1X5 1199 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 RUFY4Q6ZNE9 571 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 SEPT8Q92599 483 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 STK33Q9BYT3 514 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 SIX2Q9NPC8 291 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
CYB561A3-215ENST00000540317 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 ABL1P00519 1130 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 GARTP22102 1010 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 POLGP54098 1239 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 JAM2P57087 298 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 PLCB4Q15147 1175 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 IRF2BP2Q7Z5L9 587 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 SRGAP1Q7Z6B7 1085 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 DNAJB3Q8WWF6 145 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 GOLGA1Q92805 767 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 FAM49AQ9H0Q0 323 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 FHOD1Q9Y613 1164 aa12.91□□□□□ -0.34
CYB561A3-215ENST00000540317 RCCD1A6NED2 376 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 BTNL10A8MVZ5 291 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 GAS2O43903 313 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 GTF2H1P32780 548 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 SLC26A2P50443 739 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 EMC2Q15006 297 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 ELF2Q15723 593 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 CCDC85BQ15834 202 aaPredicted RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 MTERF2Q49AM1 385 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.347e-7■■■■■ 29.4
CYB561A3-215ENST00000540317 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 ZBTB10Q96DT7 871 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 INTS2Q9H0H0 1204 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 XPNPEP1Q9NQW7 623 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 ARGLU1Q9NWB6 273 aaPredicted RBP12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
CYB561A3-215ENST00000540317 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 GJB5O95377 273 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 CHRNA1P02708 482 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 AMHP03971 560 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 PRLRP16471 622 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 NAMPTP43490 491 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 AMPD2Q01433 879 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 STRN3Q13033 797 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 ADGRE1Q14246 886 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 FAM26DQ5JW98 314 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 IQCEQ6IPM2 695 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 RPAINQ86UA6 219 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 TRAPPC12Q8WVT3 735 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 ARNTL2Q8WYA1 636 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 FBXL18Q96ME1 805 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 NOX5Q96PH1 765 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 RAD9AQ99638 391 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 INTUQ9ULD6 942 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 SAR1BQ9Y6B6 198 aa12.9□□□□□ -0.35
CYB561A3-215ENST00000540317 TANC1Q9C0D5 1861 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 CHD9Q3L8U1 2897 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 RFXAPO00287 272 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 DLL1O00548 723 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 UPP2O95045 317 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 TUBBP07437 444 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 GHRP10912 638 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 ATP4AP20648 1035 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 SOX5P35711 763 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 TAP1Q03518 808 aa12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 CKAP4Q07065 602 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 IFI16Q16666 785 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-215ENST00000540317 CBWD6Q4V339 395 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms