RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CGNQ9P2M7 1197 aaKnown RBP14.13□□□□□ -0.15
CCDC42-202ENST00000539522 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
CCDC42-202ENST00000539522 SCN1AP35498 2009 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 PPEF2O14830 753 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 HOXA2O43364 376 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 LPXNO60711 386 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 GALTP07902 379 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 NR2F2P24468 414 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 DNAJB1P25685 340 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 ERVK-21P61565 698 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 CYP24A1Q07973 514 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 GRIK3Q13003 919 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 CAMK1Q14012 370 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 MYBPC2Q14324 1141 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 RAB30Q15771 203 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 UVSSAQ2YD98 709 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 HS2ST1Q7LGA3 356 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 FIBCD1Q8N539 461 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 COLGALT1Q8NBJ5 622 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 OR5B17Q8NGF7 314 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
CCDC42-202ENST00000539522 GTPBP4Q9BZE4 634 aaKnown RBP14.12□□□□□ -0.15
CCDC42-202ENST00000539522 PLEKHA5Q9HAU0 1116 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 TOPORSQ9NS56 1045 aaPredicted RBP14.12□□□□□ -0.15
CCDC42-202ENST00000539522 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
CCDC42-202ENST00000539522 TSC2P49815 1807 aa14.12□□□□□ -0.15
CCDC42-202ENST00000539522 NT5C1B-RDH14C9J2C7 533 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 C5orf67F2Z3F1 127 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 RFXAPO00287 272 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 KIAA0391O15091 583 aaKnown RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 CALUO43852 315 aaPredicted RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 BCAR1P56945 870 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 CLDN10P78369 228 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 POU5F1Q01860 360 aaKnown RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 ANO6Q4KMQ2 910 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 EPC2Q52LR7 807 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 LMBRD2Q68DH5 695 aaPredicted RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 FOXR2Q6PJQ5 311 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 MLKLQ8NB16 471 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 GOLGA5Q8TBA6 731 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 HSD3B7Q9H2F3 369 aa14.11□□□□□ -0.15
CCDC42-202ENST00000539522 RPF1Q9H9Y2 349 aaKnown RBP14.11□□□□□ -0.15
CCDC42-202ENST00000539522 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 ZNF233A6NK53 670 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 LRRIQ3A6PVS8 624 aaPredicted RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 NRP1O14786 923 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 PSMA7O14818 248 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 EXOC3O60645 756 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 LDHAP00338 332 aaKnown RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 THP07101 528 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 BMPR1AP36894 532 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 CLCNKBP51801 687 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 LRRC63Q05C16 580 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 PAK1Q13153 545 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 ADAM9Q13443 819 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 TUSC3Q13454 348 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 PSMD6Q15008 389 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 KYAT1Q16773 422 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 SPATA1Q5VX52 437 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 PPP2R2DQ66LE6 453 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 KCNT2Q6UVM3 1135 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 Q7L0L9 218 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 APBB1IPQ7Z5R6 666 aaPredicted RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 HACE1Q8IYU2 909 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 RNF168Q8IYW5 571 aaPredicted RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 ABI1Q8IZP0 508 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 SLC39A11Q8N1S5 342 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 ASB7Q9H672 318 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
CCDC42-202ENST00000539522 SIX4Q9UIU6 781 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 RWDD2AQ9UIY3 292 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 MSRAQ9UJ68 235 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 MTUS1Q9ULD2 1270 aa14.1□□□□□ -0.15
CCDC42-202ENST00000539522 ZC3H11AO75152 810 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC42-202ENST00000539522 KIF20AO95235 890 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 KIF4AO95239 1232 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 ZNF165P49910 485 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 YARSP54577 528 aaKnown RBP14.09□□□□□ -0.15
CCDC42-202ENST00000539522 PPP2R3AQ06190 1150 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 NCAPHQ15003 741 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 UPP1Q16831 310 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 CEP135Q66GS9 1140 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 TAS1R1Q7RTX1 841 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 C1orf127Q8N9H9 656 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 KLHL23Q8NBE8 558 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 FAM200AQ8TCP9 573 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 URGCPQ8TCY9 931 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 PARD3BQ8TEW8 1205 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 NOC3LQ8WTT2 800 aaKnown RBP14.09□□□□□ -0.15
CCDC42-202ENST00000539522 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 BPIFA3Q9BQP9 254 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 ZNF576Q9H609 170 aa14.09□□□□□ -0.15
CCDC42-202ENST00000539522 KANSL3Q9P2N6 904 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms