RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TLR2O60603 784 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 CAPZA2P47755 286 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 EIF3BP55884 814 aaKnown RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 TTC23LQ6PF05 361 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 KIAA1586Q9HCI6 787 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 AMACRQ9UHK6 382 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 NDUFB5O43674 189 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 ETFBP38117 255 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 STAT5BP51692 787 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 SHCBP1LQ9BZQ2 653 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 ZCCHC17Q9NP64 241 aaKnown RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 RPAP1Q9BWH6 1393 aaPredicted RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 DCTN3O75935 186 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 AKT1P31749 480 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 TFDP2Q14188 446 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 PHF21AQ96BD5 680 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 ISCA1Q9BUE6 129 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 IRX2Q9BZI1 471 aaPredicted RBP13.31□□□□□ -0.28
SPG11-203ENST00000535302 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 GFAPP14136 432 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 PROM2Q8N271 834 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 EFHBQ8N7U6 833 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 FLT1P17948 1338 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 WDR47O94967 919 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 HSPA1AP0DMV8 641 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 HSPA1BP0DMV9 641 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 SIX5Q8N196 739 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 C2orf40Q9H1Z8 148 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 APOL1O14791 398 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 NEK2P51955 445 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 FSCBQ5H9T9 825 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 ANGEL2Q5VTE6 544 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 VN1R5Q7Z5H4 357 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 LINC00116Q8NCU8 138 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 KIFC3Q9BVG8 833 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 KRT38O76015 456 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 GGPS1O95749 300 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 HNRNPH2P55795 449 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 SYTL3Q4VX76 610 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 TRIM51Q9BSJ1 452 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 PRR23D1E9PI22 279 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 PRR23D2P0DMB1 279 aaPredicted RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 RAD23BP54727 409 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 LAYNQ6UX15 382 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 LIMA1Q9UHB6 759 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 DMTNQ08495 405 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
SPG11-203ENST00000535302 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■■□ 19.3
SPG11-203ENST00000535302 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 SELENONQ9NZV5 590 aa13.3□□□□□ -0.28
SPG11-203ENST00000535302 ZNF157P51786 506 aaPredicted RBP13.29□□□□□ -0.28
SPG11-203ENST00000535302 EIF3EP60228 445 aaKnown RBP13.29□□□□□ -0.28
SPG11-203ENST00000535302 ZNF235Q14590 738 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 PDXDC1Q6P996 788 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 CHSY1Q86X52 802 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 SNF8Q96H20 258 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ELMO2Q96JJ3 720 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
SPG11-203ENST00000535302 BRAFP15056 766 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■■■■□ 22.5
SPG11-203ENST00000535302 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
SPG11-203ENST00000535302 SCG3Q8WXD2 468 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms