RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CPB2Q96IY4 423 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CORO1BQ9BR76 489 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 UNC45AQ9H3U1 944 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 NXF3Q9H4D5 531 aaKnown RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 KLK14Q9P0G3 267 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 GIT1Q9Y2X7 761 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CNTNAP5Q8WYK1 1306 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 LAMA5O15230 3695 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CCDC163A0A0D9SF12 145 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 BCLAF3A2AJT9 711 aaKnown RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CASTOR2A6NHX0 329 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 PCNX2A6NKB5 2137 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 DCLK1O15075 740 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 MSH4O15457 936 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 ATMINO43313 823 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 PRC1O43663 620 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 EDIL3O43854 480 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 TSPAN1O60635 241 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 IGFBP6P24592 240 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 SFNP31947 248 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CIITAP33076 1130 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 KPNA1P52294 538 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 JAK3P52333 1124 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 FUT2Q10981 343 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 GRIK3Q13003 919 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CCINQ13939 588 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 PLA2G4FQ68DD2 849 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 ANO5Q75V66 913 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 MICU3Q86XE3 530 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 MFSD6LQ8IWD5 586 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 TTC8Q8TAM2 541 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 DEPDC1BQ8WUY9 529 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 TMEM143Q96AN5 459 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 RSPRY1Q96DX4 576 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CSRNP2Q9H175 543 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 DUSP15Q9H1R2 295 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 BARHL2Q9NY43 387 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
CLIP1-206ENST00000535290 ASCC3Q8N3C0 2202 aaKnown RBP9.24□□□□□ -0.93
CLIP1-206ENST00000535290 COL4A2P08572 1712 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 ARHGEF37A1IGU5 675 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 MYBPHLA2RUH7 354 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 HEPACAM2A8MVW5 462 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 SPECC1L-ADORA2AF8WAN1 911 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 GAS7O60861 476 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 MOSPD3O75425 235 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 AKAP3O75969 853 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 GJA1P17302 382 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 CTHP32929 405 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 NPEPPSP55786 919 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 FGD1P98174 961 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 PON2Q15165 354 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 UAP1L1Q3KQV9 507 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 NOTUMQ6P988 496 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 RNF149Q8NC42 400 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 ZSCAN18Q8TBC5 510 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-206ENST00000535290 CSGALNACT1Q8TDX6 532 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 SLC5A5Q92911 643 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 RIT2Q99578 217 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 C8orf33Q9H7E9 229 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-206ENST00000535290 TMEM9BQ9NQ34 198 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 CACNA2D2Q9NY47 1150 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 SNTG2Q9NY99 539 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 MTRRQ9UBK8 725 aa9.23□□□□□ -0.93
CLIP1-206ENST00000535290 MYO18BQ8IUG5 2567 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 EIF4E1BA6NMX2 242 aaKnown RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 PATE3B3GLJ2 98 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 ZNF197O14709 1029 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 MICAL2O94851 1124 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 ERLIN2O94905 339 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 SEC24BO95487 1268 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 LRG1P02750 347 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 FGFR3P22607 806 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 LIFRP42702 1097 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 SCAPQ12770 1279 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 TUSC3Q13454 348 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 LRCH2Q5VUJ6 765 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 C1orf228Q6PIY5 440 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 MIER3Q7Z3K6 550 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 CDR2LQ86X02 465 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 RALGPS2Q86X27 583 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-206ENST00000535290 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 SYNPOQ8N3V7 929 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 GLIS3Q8NEA6 775 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
CLIP1-206ENST00000535290 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms