RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TSPEAR	Q8WU66	669 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	TGFBRAP1	Q8WUH2	860 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	ZNF480	Q8WV37	535 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	MYEOV	Q96EZ4	313 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	SLC46A2	Q9BY10	475 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	PUS7L	Q9H0K6	701 aa	Known RBP	5.85	□□□□□ -1.47
ATM-223	ENST00000533979	RBM12	Q9NTZ6	932 aa	Known RBP	5.85	□□□□□ -1.47
ATM-223	ENST00000533979	C14orf119	Q9NWQ9	140 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	GOLGA6A	Q9NYA3	693 aa		5.85	□□□□□ -1.47
ATM-223	ENST00000533979	NOB1	Q9ULX3	412 aa	Known RBP	5.85	□□□□□ -1.47
ATM-223	ENST00000533979	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	5.84	□□□□□ -1.47
ATM-223	ENST00000533979	GAGE12B	A1L429	117 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	GAGE12H	A6NDE8	117 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	PJA2	O43164	708 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	PRKD3	O94806	890 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	FOS	P01100	380 aa	Predicted RBP	5.84	□□□□□ -1.47
ATM-223	ENST00000533979	GSPT1	P15170	499 aa	Known RBP	5.84	□□□□□ -1.47
ATM-223	ENST00000533979	LAG3	P18627	525 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	FLT3LG	P49771	235 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	SLC5A3	P53794	718 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	PTTG1IP	P53801	180 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	TAP1	Q03518	808 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	PTPA	Q15257	358 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	MFSD14B	Q5SR56	506 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	LY6G5C	Q5SRR4	150 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	PRAMEF14	Q5SWL7	426 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	LAIR1	Q6GTX8	287 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	CLEC4G	Q6UXB4	293 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979		Q6ZPA2	131 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979		Q6ZVL8	140 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	DGKH	Q86XP1	1220 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	ZFP28	Q8NHY6	868 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	FAM30A	Q9NZY2	134 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	POGK	Q9P215	609 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	ZNF180	Q9UJW8	692 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	TRHDE	Q9UKU6	1024 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	HS3ST4	Q9Y661	456 aa		5.84	□□□□□ -1.47
ATM-223	ENST00000533979	LEFTY2	O00292	366 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	RNASET2	O00584	256 aa	Known RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	GABRD	O14764	452 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	ABLIM3	O94929	683 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	KRT4	P19013	534 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	APOBEC3A	P31941	199 aa	Predicted RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	PTPN7	P35236	360 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	NHLH2	Q02577	135 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	MST1L	Q2TV78	715 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	TIGD2	Q4W5G0	525 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	TOR2A	Q5JU69	321 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	C10orf62	Q5T681	223 aa	Predicted RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	GDF7	Q7Z4P5	450 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	SYT12	Q8IV01	421 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	TFAP2C	Q92754	450 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	CEP95	Q96GE4	821 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	ACE2	Q9BYF1	805 aa	Predicted RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	RHOBTB2	Q9BYZ6	727 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	QRSL1	Q9H0R6	528 aa	Known RBP	5.83	□□□□□ -1.48
ATM-223	ENST00000533979	DKK2	Q9UBU2	259 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	SPEF1	Q9Y4P9	236 aa		5.83	□□□□□ -1.48
ATM-223	ENST00000533979	ATRNL1	Q5VV63	1379 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	TMEM200C	A6NKL6	621 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	DRGX	A6NNA5	263 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	RAMP2	O60895	175 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	ABHD16A	O95870	558 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	FGA	P02671	866 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	ZSCAN20	P17040	1043 aa	Predicted RBP	5.82	□□□□□ -1.48
ATM-223	ENST00000533979	BMPR1A	P36894	532 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	MCAM	P43121	646 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	MTNR1B	P49286	362 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	CLRN1	P58418	232 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	MALL	Q13021	153 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	SP140	Q13342	867 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	METRNL	Q641Q3	311 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	CNTD1	Q8N815	330 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	PPM1E	Q8WY54	764 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	CYFIP2	Q96F07	1278 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	ZNF768	Q9H5H4	540 aa	Known RBP	5.82	□□□□□ -1.48
ATM-223	ENST00000533979	DNAJC28	Q9NX36	388 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	TRPM5	Q9NZQ8	1165 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	CHST2	Q9Y4C5	530 aa		5.82	□□□□□ -1.48
ATM-223	ENST00000533979	PNPLA7	Q6ZV29	1317 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ARHGEF11	O15085	1522 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	SNRPA1	P09661	255 aa	Known RBP	5.81	□□□□□ -1.48
ATM-223	ENST00000533979	IL2RB	P14784	551 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ALOX15	P16050	662 aa	Predicted RBP	5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ZFP36	P26651	326 aa	Known RBP	5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ECHS1	P30084	290 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	PER3	P56645	1201 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ERVK-21	P61565	698 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	POU5F1B	Q06416	359 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	PPP3CA	Q08209	521 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	MORC3	Q14149	939 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.81	□□□□□ -1.48
ATM-223	ENST00000533979	SYDE2	Q5VT97	1194 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	CXorf57	Q6NSI4	855 aa	Known RBP	5.81	□□□□□ -1.48
ATM-223	ENST00000533979	OR10H5	Q8NGA6	315 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	SLC35B2	Q8TB61	432 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	PROKR1	Q8TCW9	393 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	COG1	Q8WTW3	980 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	JPH3	Q8WXH2	748 aa	Predicted RBP	5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms