RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 FBXL18Q96ME1 805 aa22.79■■□□□ 1.24
VPS51-211ENST00000533487 AGPAT3Q9NRZ7 376 aa22.79■■□□□ 1.24
VPS51-211ENST00000533487 ADAM28Q9UKQ2 775 aa22.79■■□□□ 1.24
VPS51-211ENST00000533487 TISP43B9A030 160 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 FSCN2O14926 492 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 PBX3P40426 434 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 TNFSF9P41273 254 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 ACOT2P49753 483 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 CAMK1Q14012 370 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 ZBTB6Q15916 424 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 ZNF658Q5TYW1 1059 aaPredicted RBP22.78■■□□□ 1.24
VPS51-211ENST00000533487 SLC9A9Q8IVB4 645 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 BRSK2Q8IWQ3 736 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 CDCA3Q99618 268 aaPredicted RBP22.78■■□□□ 1.24
VPS51-211ENST00000533487 CBWD1Q9BRT8 395 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 PCDHA5Q9Y5H7 936 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 CDH23Q9H251 3354 aa22.78■■□□□ 1.24
VPS51-211ENST00000533487 ZNF233A6NK53 670 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 LACTBL1A8MY62 500 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 NT5C1B-RDH14C9J2C7 533 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 TRAPPC3O43617 180 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 EFEMP2O95967 443 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 SMC1AQ14683 1233 aaKnown RBP22.77■■□□□ 1.24
VPS51-211ENST00000533487 NFIL3Q16649 462 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 UPP1Q16831 310 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 SEZ6Q53EL9 994 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 GLRA4Q5JXX5 417 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 CRELD2Q6UXH1 353 aaPredicted RBP22.77■■□□□ 1.24
VPS51-211ENST00000533487 NELFCDQ8IXH7 590 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 RNF168Q8IYW5 571 aaPredicted RBP22.77■■□□□ 1.24
VPS51-211ENST00000533487 XXYLT1Q8NBI6 393 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 ZMAT2Q96NC0 199 aaKnown RBP22.77■■□□□ 1.24
VPS51-211ENST00000533487 MARCH5Q9NX47 278 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 HSPBP1Q9NZL4 362 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 TRAF3IP3Q9Y228 551 aa22.77■■□□□ 1.24
VPS51-211ENST00000533487 PRG3Q9Y2Y8 225 aaPredicted RBP22.77■■□□□ 1.24
VPS51-211ENST00000533487 SF3B1O75533 1304 aaKnown RBP eCLIP22.77■■□□□ 1.24
VPS51-211ENST00000533487 CALUO43852 315 aaPredicted RBP22.76■■□□□ 1.23
VPS51-211ENST00000533487 TADA2AO75478 443 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 SOD2P04179 222 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 CTSAP10619 480 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 DNAJB1P25685 340 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 LRPAP1P30533 357 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 TMC7Q7Z402 723 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 TMEM173Q86WV6 379 aaPredicted RBP22.76■■□□□ 1.23
VPS51-211ENST00000533487 VPS52Q8N1B4 723 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 BEST2Q8NFU1 509 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 MICAL1Q8TDZ2 1067 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 KIF12Q96FN5 646 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 TCF25Q9BQ70 676 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 FAM213AQ9BRX8 229 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 HERC2P3Q9BVR0 1158 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 ZBP1Q9H171 429 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 KCTD10Q9H3F6 313 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 ENTPD7Q9NQZ7 604 aa22.76■■□□□ 1.23
VPS51-211ENST00000533487 CASTOR2A6NHX0 329 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 MEFVO15553 781 aaPredicted RBP22.75■■□□□ 1.23
VPS51-211ENST00000533487 TMEM132DQ14C87 1099 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 ZBTB41Q5SVQ8 909 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 SPATA1Q5VX52 437 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 PDXDC1Q6P996 788 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 TRIML1Q8N9V2 468 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 CACTINQ8WUQ7 758 aaKnown RBP22.75■■□□□ 1.23
VPS51-211ENST00000533487 LMBRD1Q9NUN5 540 aa22.75■■□□□ 1.23
VPS51-211ENST00000533487 RBAKQ9NYW8 714 aaPredicted RBP22.75■■□□□ 1.23
VPS51-211ENST00000533487 C1RP00736 705 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 RPL13P26373 211 aaKnown RBP22.74■■□□□ 1.23
VPS51-211ENST00000533487 ERVFC1P60507 584 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 CREMQ03060 361 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 STIM1Q13586 685 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 USP41Q3LFD5 358 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 FUT10Q6P4F1 479 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 MRPL43Q8N983 215 aaKnown RBP22.74■■□□□ 1.23
VPS51-211ENST00000533487 CXCL16Q9H2A7 254 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 IKZF4Q9H2S9 585 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.74■■□□□ 1.23
VPS51-211ENST00000533487 COG5Q9UP83 839 aa22.74■■□□□ 1.23
VPS51-211ENST00000533487 MAPK13O15264 365 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 B3GAT3O94766 335 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 URODP06132 367 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 CLCNKBP51801 687 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 COL19A1Q14993 1142 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 SNRNP35Q16560 246 aaKnown RBP22.73■■□□□ 1.23
VPS51-211ENST00000533487 EDRF1Q3B7T1 1238 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 FOXR2Q6PJQ5 311 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 BCL7CQ8WUZ0 217 aaPredicted RBP22.73■■□□□ 1.23
VPS51-211ENST00000533487 SAAL1Q96ER3 474 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 PCIF1Q9H4Z3 704 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 MRPL17Q9NRX2 175 aaKnown RBP22.73■■□□□ 1.23
VPS51-211ENST00000533487 CHST7Q9NS84 486 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 DMAC2Q9NW81 257 aa22.73■■□□□ 1.23
VPS51-211ENST00000533487 ARHGEF37A1IGU5 675 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 PODXLO00592 558 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 KIF4AO95239 1232 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 GLUD2P49448 558 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 DSG1Q02413 1049 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 SOX4Q06945 474 aaPredicted RBP22.72■■□□□ 1.23
VPS51-211ENST00000533487 ENPEPQ07075 957 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 JADE1Q6IE81 842 aa22.72■■□□□ 1.23
VPS51-211ENST00000533487 USP37Q86T82 979 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms