RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
SRPRA-206ENST00000532259 TCP11Q8WWU5 503 aa16.33■□□□□ 0.2
SRPRA-206ENST00000532259 C16orf70Q9BSU1 422 aa16.33■□□□□ 0.2
SRPRA-206ENST00000532259 ISCUQ9H1K1 167 aa16.33■□□□□ 0.2
SRPRA-206ENST00000532259 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
SRPRA-206ENST00000532259 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
SRPRA-206ENST00000532259 NCANO14594 1321 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 GH1P01241 217 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 GLI1P08151 1106 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 ITGA4P13612 1032 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
SRPRA-206ENST00000532259 EFNA5P52803 228 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 GYS2P54840 703 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 GRB14Q14449 540 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 CPA5Q8WXQ8 436 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 KCNN1Q92952 543 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 IFT122Q9HBG6 1241 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 SLC45A1Q9Y2W3 748 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 HTTP42858 3142 aa16.32■□□□□ 0.2
SRPRA-206ENST00000532259 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.22e-11■■■■■ 27.4
SRPRA-206ENST00000532259 STRNO43815 780 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 RTN2O75298 545 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 GPC5P78333 572 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 CDR2Q01850 454 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 TMEM270Q6UE05 265 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 ZPBP2Q6X784 338 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 CCNI2Q6ZMN8 369 aaPredicted RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 IFT81Q8WYA0 676 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 ZNF653Q96CK0 615 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 VTA1Q9NP79 307 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 A0A087WZ62 844 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 TARSL2A2RTX5 802 aaKnown RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 H3BQF6 201 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 OAS2P29728 719 aaKnown RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 ABCD1P33897 745 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 TFAMQ00059 246 aaKnown RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 NCOA4Q13772 614 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 ZNF394Q53GI3 561 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 SYCE1Q8N0S2 351 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 GTF3C2Q8WUA4 911 aaPredicted RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 CGRRF1Q99675 332 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 FDXACB1Q9BRP7 624 aaPredicted RBP16.31■□□□□ 0.2
SRPRA-206ENST00000532259 AKT3Q9Y243 479 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 GINS2Q9Y248 185 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 PCDHB4Q9Y5E5 795 aa16.31■□□□□ 0.2
SRPRA-206ENST00000532259 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 MAP2K7O14733 419 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 CD58P19256 250 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 NOP14P78316 857 aaKnown RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 GCNT1Q02742 428 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 MBTD1Q05BQ5 628 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 DCAF12L1Q5VU92 463 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 PARK7Q99497 189 aaKnown RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 STIM2Q9P246 746 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 ALG6Q9Y672 507 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 HEXIM1O94992 359 aaKnown RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
SRPRA-206ENST00000532259 SLC26A2P50443 739 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 PTENP60484 403 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 FKBP1BP68106 108 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 FAM193AP78312 1265 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 FAM110CQ1W6H9 321 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 SCARA5Q6ZMJ2 495 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 BRSK2Q8IWQ3 736 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 KRT35Q92764 455 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 HES6Q96HZ4 224 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 CPB2Q96IY4 423 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 FZD8Q9H461 694 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
SRPRA-206ENST00000532259 UNCXA6NJT0 531 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 H3BRB1 525 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ALG3Q92685 438 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 CCDC102AQ96A19 550 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 TRIM7Q9C029 511 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
SRPRA-206ENST00000532259 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 MGAMO43451 1857 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 RBM47A0AV96 593 aaKnown RBP16.29■□□□□ 0.2
SRPRA-206ENST00000532259 GPR25O00155 361 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 PGRMC1O00264 195 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms