RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SLC39A4Q6P5W5 647 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CREBRFQ8IUR6 639 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 HERC6Q8IVU3 1022 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 SPATA18Q8TC71 538 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 PARD3BQ8TEW8 1205 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 SAAL1Q96ER3 474 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ZBTB45Q96K62 511 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CGRRF1Q99675 332 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 FUCA2Q9BTY2 467 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 EIF2AQ9BY44 585 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 FGFBP2Q9BYJ0 223 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 PUF60Q9UHX1 559 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ANK1P16157 1881 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TBKBP1A7MCY6 615 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 GOLGA6L6A8MZA4 724 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 FAM189A1O60320 539 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 MGEA5O60502 916 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 OFD1O75665 1012 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 AKAP3O75969 853 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 UPP2O95045 317 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SERPINC1P01008 464 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 AFPP02771 609 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 RB1P06400 928 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TPM1P09493 284 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 FAM163BP0C2L3 166 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 DLATP10515 647 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 MLH1P40692 756 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 MXI1P50539 228 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 YWHAEP62258 255 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TFAMQ00059 246 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 UBE3AQ05086 875 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 BIRC3Q13489 604 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SGSM1Q2NKQ1 1148 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 SV2CQ496J9 727 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TCP11X2Q5H9J9 407 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 DCAF17Q5H9S7 520 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 DCLRE1AQ6PJP8 1040 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 ALKAL1Q6UXT8 129 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 LRRC55Q6ZSA7 311 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 AOPEPQ8N6M6 819 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 LRRC52Q8N7C0 313 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 RDH13Q8NBN7 331 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 GLIS3Q8NEA6 775 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 CNOT6LQ96LI5 555 aaKnown RBP8.57□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF558Q96NG5 402 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 GAD1Q99259 594 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TUBGCP2Q9BSJ2 902 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 TMEM8AQ9HCN3 771 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 INTS13Q9NVM9 706 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 DSEQ9UL01 958 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 INPP5FQ9Y2H2 1132 aa8.57□□□□□ -1.04
SSBP3-211ENST00000528787 GOLGA8IPA6NC78 632 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TRIM49BA6NDI0 452 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 LRRC10BA6NIK2 292 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 GOLGA8JA6NMD2 632 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 LACTBL1A8MY62 500 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TMEM189-UBE2V1I3L0A0 370 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 PES1O00541 588 aaKnown RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 LPXNO60711 386 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CLSTN1O94985 981 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TBXAS1P24557 533 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 AKAP5P24588 427 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 LRPAP1P30533 357 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 ELMSAN1Q6PJG2 1045 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CRELD2Q6UXH1 353 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 AGMOQ6ZNB7 445 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 C16orf59Q7L2K0 433 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 ENOSF1Q7L5Y1 443 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 RTN4RL1Q86UN2 441 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CDR2LQ86X02 465 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CBWD2Q8IUF1 395 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 FBXL13Q8NEE6 735 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 PPP2R3CQ969Q6 453 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 JAKMIP2Q96AA8 810 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CCDC127Q96BQ5 260 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF689Q96CS4 500 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TMEM169Q96HH4 297 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 DUSP9Q99956 384 aaKnown RBP8.56□□□□□ -1.04
SSBP3-211ENST00000528787 C11orf84Q9BUA3 381 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms