RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ADAM7Q9H2U9 754 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 MRPL44Q9H9J2 332 aaKnown RBP28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 CITO14578 2027 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 A0A0B4J269 797 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 FRMD3A2A2Y4 597 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 MEFVO15553 781 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 B3GAT3O94766 335 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 IDEP14735 1019 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 CREMQ03060 361 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 SOX4Q06945 474 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 BECN1Q14457 450 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 HERC4Q5GLZ8 1057 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 FAM171A1Q5VUB5 890 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 FBXL18Q96ME1 805 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 TTPALQ9BTX7 342 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 PHF7Q9BWX1 381 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 GOLGA2P5Q9HBQ8 144 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 OLFML3Q9NRN5 406 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 KBTBD4Q9NVX7 518 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 FNIP2Q9P278 1114 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 ZDHHC9Q9Y397 364 aa28.76■■■□□ 2.19
TSPAN4-217ENST00000527644 OGTO15294 1046 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 PPP1R37O75864 691 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 C1RP00736 705 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 AMPD3Q01432 767 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 CBX2Q14781 532 aaPredicted RBP28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 SLC39A4Q6P5W5 647 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 DHX58Q96C10 678 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 STRA6Q9BX79 667 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 PANK4Q9NVE7 773 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 FAM13BQ9NYF5 915 aa28.75■■■□□ 2.19
TSPAN4-217ENST00000527644 C5orf42Q9H799 3197 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 CXCL8P10145 99 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 RPL9P32969 192 aaKnown RBP28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 RTP2Q5QGT7 225 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 SLFN12LQ6IEE8 588 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 MSTO1Q9BUK6 570 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 DPP7Q9UHL4 492 aa28.74■■■□□ 2.19
TSPAN4-217ENST00000527644 TTC26A0AVF1 554 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 ANKRD63C9JTQ0 380 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 TRAPPC3O43617 180 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 FAM189A1O60320 539 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 GLUD1P00367 558 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 TNFSF9P41273 254 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 RARS2Q5T160 578 aaKnown RBP28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 RESP18Q5W5W9 173 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 PDXDC1Q6P996 788 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 CD300LGQ6UXG3 332 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 CEP57Q86XR8 500 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 CCDC65Q8IXS2 484 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 C12orf76Q8N812 135 aaPredicted RBP28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 PIK3R5Q8WYR1 880 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 STAMQ92783 540 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 NECTIN4Q96NY8 510 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 TBC1D7Q9P0N9 293 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 PCDHB13Q9Y5F0 798 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 STYXL1Q9Y6J8 313 aa28.73■■■□□ 2.19
TSPAN4-217ENST00000527644 PODXLO00592 558 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 ALCAMQ13740 583 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 ELMSAN1Q6PJG2 1045 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 C18orf25Q96B23 403 aaPredicted RBP28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 RIPOR3Q96MK2 946 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 ACCSQ96QU6 501 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 TSPAN18Q96SJ8 248 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 SFXN1Q9H9B4 322 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 RPF1Q9H9Y2 349 aaKnown RBP28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 MAGEF1Q9HAY2 307 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 EXOC7Q9UPT5 735 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 ATP6V1DQ9Y5K8 247 aa28.72■■■□□ 2.19
TSPAN4-217ENST00000527644 SPDYE4A6NLX3 237 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 POLR2DO15514 142 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 GCNT3O95395 438 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 FGFR3P22607 806 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 IGFBP6P24592 240 aaPredicted RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 MTHFRP42898 656 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 KRT85P78386 507 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 PPP2R3AQ06190 1150 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 ZBTB41Q5SVQ8 909 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 L1TD1Q5T7N2 865 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 PRSS55Q6UWB4 352 aaPredicted RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 C3orf58Q8NDZ4 430 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 LNX1Q8TBB1 728 aaPredicted RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 KHSRPQ92945 711 aaKnown RBP eCLIP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 PYM1Q9BRP8 204 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 TRIM9Q9C026 710 aa28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 CPSF3Q9UKF6 684 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-217ENST00000527644 LOC730098B7Z3J9 87 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 ADRB2P07550 413 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 POSTNQ15063 836 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 ENOX2Q16206 610 aaKnown RBP28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 PSMD5Q16401 504 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 ATAT1Q5SQI0 421 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 ADALQ6DHV7 355 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 CNNM4Q6P4Q7 775 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 CD302Q8IX05 232 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 HDAC7Q8WUI4 952 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 MAN1C1Q9NR34 630 aa28.7■■■□□ 2.18
TSPAN4-217ENST00000527644 LACTBL1A8MY62 500 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms