RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TM4SF4P48230 202 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 GALCP54803 685 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 BEND6Q5SZJ8 279 aaPredicted RBP17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 RPUSD2Q8IZ73 545 aaKnown RBP17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 OLIG1Q8TAK6 271 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 SLC20A1Q8WUM9 679 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 FAM212AQ96EL1 285 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 FAM84AQ96KN4 292 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 SGPL1O95470 568 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 TCP1P17987 556 aaKnown RBP17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 MARCH8Q5T0T0 291 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 WDR93Q6P2C0 686 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 THNSL1Q8IYQ7 743 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 EPS8L1Q8TE68 723 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 CTNNBL1Q8WYA6 563 aaPredicted RBP17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 HYOU1Q9Y4L1 999 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 POLR3GO15318 223 aaPredicted RBP17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 VNN1O95497 513 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 TMEM253P0C7T8 217 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 KRT5P13647 590 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CPT1AP50416 773 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 PDE6CP51160 858 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 OR5B17Q8NGF7 314 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 PPP1R16BQ96T49 567 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 IMPG2Q9BZV3 1241 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 Q9Y3F1 56 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 NRCAMQ92823 1304 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CA12O43570 354 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CLSTN1O94985 981 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 F2P00734 622 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 TFRCP02786 760 aaKnown RBP17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CYP11B1P15538 503 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 DUOXA2Q1HG44 320 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 NOP9Q86U38 636 aaKnown RBP17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 SLC47A2Q86VL8 602 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 CAPZA3Q96KX2 299 aa17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 NOCTQ9UK39 431 aaKnown RBP17.42■□□□□ 0.38
SNRNP35-204ENST00000527158 ANKRD62A6NC57 917 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 NCOA4Q13772 614 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 MAP9Q49MG5 647 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 EEF1DP3Q658K8 133 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 NFRKBQ6P4R8 1299 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 ZNF410Q86VK4 478 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 ELMO3Q96BJ8 720 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 OSBPL9Q96SU4 736 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 CDT1Q9H211 546 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 L1RE1Q9UN81 338 aa17.41■□□□□ 0.38
SNRNP35-204ENST00000527158 GRID2IPA4D2P6 1211 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 BPIFB4P59827 614 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 CDR2LQ86X02 465 aaPredicted RBP17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 DHX38Q92620 1227 aaKnown RBP17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 RPF1Q9H9Y2 349 aaKnown RBP17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 NCK2O43639 380 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 ERLIN2O94905 339 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 IL18RAPO95256 599 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 FTCDO95954 541 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 SMIM10L2AP0DMW4 78 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 SMIM10L2BP0DMW5 78 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 MCF2P10911 925 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 GZMAP12544 262 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 ABCB4P21439 1286 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 OSTNP61366 133 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 CDR2Q01850 454 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 TAS2R14Q9NYV8 317 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 EVPLQ92817 2033 aa17.4■□□□□ 0.38
SNRNP35-204ENST00000527158 TARSL2A2RTX5 802 aaKnown RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 ZNF185O15231 689 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 RTN2O75298 545 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 ALDH1A1P00352 501 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 FTLP02792 175 aaPredicted RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 FCGRTP55899 365 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 NOP14P78316 857 aaKnown RBP17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 CUL2Q13617 745 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 MFSD10Q14728 455 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 AMHR2Q16671 573 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 KYAT1Q16773 422 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 SPOPLQ6IQ16 392 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 PALB2Q86YC2 1186 aa17.39■□□□□ 0.37
SNRNP35-204ENST00000527158 SYCE1Q8N0S2 351 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms