RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 IGFBP6P24592 240 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 ARL2P36404 184 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 SSRP1Q08945 709 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 ELAVL2Q12926 359 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 NAB2Q15742 525 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 PDXDC1Q6P996 788 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 TPH2Q8IWU9 490 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 NFKBIZQ9BYH8 718 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 BRD9Q9H8M2 597 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 GDE1Q9NZC3 331 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
CCDC90B-205ENST00000525916 BAHCC1Q9P281 2608 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 TTLL13PA6NNM8 815 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 MAN2B1O00754 1011 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 CCNT1O60563 726 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 RECQL4O94761 1208 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 DEXIO95424 95 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 THP07101 528 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 FGFR3P22607 806 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 CCR3P51677 355 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 SATB1Q01826 763 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 DMWDQ09019 674 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 PPP2R5DQ14738 602 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 PPP4R3AQ6IN85 833 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 NEK8Q86SG6 692 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 FAM3CQ92520 227 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 TCEAL4Q96EI5 215 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 POLR3FQ9H1D9 316 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 LMAN1LQ9HAT1 526 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 KCNJ14Q9UNX9 436 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 FRYQ5TBA9 3013 aa13.81□□□□□ -0.2
CCDC90B-205ENST00000525916 CCDC194A0A1B0GVG4 234 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 MARCH6O60337 910 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 DGAT1O75907 488 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 SLITRK3O94933 977 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 GCFC2P16383 781 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 TKTP29401 623 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 CSRP2Q16527 193 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 FAM78AQ5JUQ0 283 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 PRSS36Q5K4E3 855 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 IER2Q9BTL4 223 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 ZFP14Q9HCL3 533 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 AVENQ9NQS1 362 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 ANGPTL2Q9UKU9 493 aa13.8□□□□□ -0.2
CCDC90B-205ENST00000525916 CHURC1-FNTBB4DL54 471 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 I3L4J1 428 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 TBX3O15119 743 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 HRO43593 1189 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 LRG1P02750 347 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 PTPN2P17706 415 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 CXCL12P48061 93 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 FNTBP49356 437 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 EVCP57679 992 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 GAS6Q14393 721 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 GLRA4Q5JXX5 417 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 VITQ6UXI7 678 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 CCDC43Q96MW1 224 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 ASB16Q96NS5 453 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 KIF2CQ99661 725 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 EIF2AK1Q9BQI3 630 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 CORO1BQ9BR76 489 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 PDZD7Q9H5P4 517 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 ZNF334Q9HCZ1 680 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 PIAS3Q9Y6X2 628 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 NCANO14594 1321 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
CCDC90B-205ENST00000525916 ZNF638Q14966 1978 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 A0A087WWV3 80 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 B3GAT3O94766 335 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 CHRNB1P11230 501 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 PMLP29590 882 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 GDI1P31150 447 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 CCR2P41597 374 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 RARRES1P49788 294 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 ROR1Q01973 937 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 PIK3AP1Q6ZUJ8 805 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms