RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 VPS11Q9H270 941 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 PLA2G3Q9NZ20 509 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 MOCS1Q9NZB8 636 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 ZFR2Q9UPR6 939 aaKnown RBP6.28□□□□□ -1.4
SKP1-211ENST00000523359 RUVBL1Q9Y265 456 aaKnown RBP6.28□□□□□ -1.4
SKP1-211ENST00000523359 NR2E3Q9Y5X4 410 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 ATRNL1Q5VV63 1379 aa6.28□□□□□ -1.4
SKP1-211ENST00000523359 SLC16A6O15403 523 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 FOXS1O43638 330 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 AMHP03971 560 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 MSX2P35548 267 aaPredicted RBP6.27□□□□□ -1.41
SKP1-211ENST00000523359 TLE1Q04724 770 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 FOXL1Q12952 345 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 R3HDM1Q15032 1099 aaKnown RBP6.27□□□□□ -1.41
SKP1-211ENST00000523359 CCDC157Q569K6 752 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 ANKS6Q68DC2 871 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 DCBLD1Q8N8Z6 715 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 SLC35B2Q8TB61 432 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 FAM193BQ96PV7 902 aaPredicted RBP6.27□□□□□ -1.41
SKP1-211ENST00000523359 ZNF747Q9BV97 191 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 CALCOCO1Q9P1Z2 691 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 POLHQ9Y253 713 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 PCDHA3Q9Y5H8 950 aa6.27□□□□□ -1.41
SKP1-211ENST00000523359 A6NNZ2 444 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 CXorf49A8MYA2 514 aaPredicted RBP6.26□□□□□ -1.41
SKP1-211ENST00000523359 B3GALT2O43825 422 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 TUSC2O75896 110 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 HTR1BP28222 390 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 GDF5P43026 501 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 HK3P52790 923 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 CTXN1P60606 82 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 NOGQ13253 232 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 SNAPC2Q13487 334 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 LLGL1Q15334 1064 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 ZFPM1Q8IX07 1006 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 SORCS2Q96PQ0 1159 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 MYOCQ99972 504 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 LRFN3Q9BTN0 628 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 MRI1Q9BV20 369 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 LSM14BQ9BX40 385 aaKnown RBP6.26□□□□□ -1.41
SKP1-211ENST00000523359 SH3BP1Q9Y3L3 701 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 SLC30A1Q9Y6M5 507 aa6.26□□□□□ -1.41
SKP1-211ENST00000523359 TEX33O43247 280 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 RAD17O75943 681 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 MALP21145 153 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 PTH1RQ03431 593 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 GALEQ14376 348 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 ELAVL1Q15717 326 aaKnown RBP6.25□□□□□ -1.41
SKP1-211ENST00000523359 MFSD5Q6N075 450 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 PLXDC1Q8IUK5 500 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
SKP1-211ENST00000523359 D2HGDHQ8N465 521 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 KLHDC4Q8TBB5 520 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 B3GNT5Q9BYG0 378 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 ABCF2Q9UG63 623 aa6.25□□□□□ -1.41
SKP1-211ENST00000523359 SLPIP03973 132 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 ATP5JP18859 108 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 IL12RB1P42701 662 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 RAP2BP61225 183 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 OTUD7BQ6GQQ9 843 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 NPNTQ6UXI9 565 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 POLNQ7Z5Q5 900 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 APBB1IPQ7Z5R6 666 aaPredicted RBP6.24□□□□□ -1.41
SKP1-211ENST00000523359 DAAM2Q86T65 1068 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 SH2D3CQ8N5H7 860 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 MB21D1Q8N884 522 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 CDK5RAP3Q96JB5 506 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 CPPED1Q9BRF8 314 aaPredicted RBP6.24□□□□□ -1.41
SKP1-211ENST00000523359 C11orf54Q9H0W9 315 aaPredicted RBP6.24□□□□□ -1.41
SKP1-211ENST00000523359 ARMT1Q9H993 441 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 MAN1C1Q9NR34 630 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 LMBRD1Q9NUN5 540 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 HDAC5Q9UQL6 1122 aa6.24□□□□□ -1.41
SKP1-211ENST00000523359 TBKBP1A7MCY6 615 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 B5MCH6 92 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 H3BUI4 141 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 PJA2O43164 708 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 MFAP3LO75121 409 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 CAND2O75155 1236 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 ARIH2O95376 493 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 CD1AP06126 327 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 SNRPA1P09661 255 aaKnown RBP6.23□□□□□ -1.41
SKP1-211ENST00000523359 SBK3P0C264 359 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 GNAT2P19087 354 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 SMARCA1P28370 1054 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 USP14P54578 494 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 CLRN1P58418 232 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 NKX6-1P78426 367 aaPredicted RBP6.23□□□□□ -1.41
SKP1-211ENST00000523359 CREMQ03060 361 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 KSR2Q6VAB6 950 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 SEM1Q6ZVN7 128 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 DOK3Q7L591 496 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 CHST15Q7LFX5 561 aaPredicted RBP6.23□□□□□ -1.41
SKP1-211ENST00000523359 FAM83AQ86UY5 434 aa6.23□□□□□ -1.41
SKP1-211ENST00000523359 COL23A1Q86Y22 540 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms