RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 CPSF3Q9UKF6 684 aaKnown RBP15.85■□□□□ 0.13
TOP1MT-203ENST00000517857 SF3B1O75533 1304 aaKnown RBP eCLIP15.85■□□□□ 0.13
TOP1MT-203ENST00000517857 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 HIDE1A8MVS5 230 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 LACTBL1A8MY62 500 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 C2CD2LO14523 706 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 PER2O15055 1255 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 MEFVO15553 781 aaPredicted RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 XPOTO43592 962 aaKnown RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 KINO60870 393 aaKnown RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 GADD45BO75293 160 aaPredicted RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 CXCL14O95715 111 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 SOD2P04179 222 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 CTSAP10619 480 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 ADSSP30520 456 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 CLCNKBP51801 687 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 SOX4Q06945 474 aaPredicted RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 DPYDQ12882 1025 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 PSMD2Q13200 908 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 KIAA1841Q6NSI8 718 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 HS2ST1Q7LGA3 356 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 ZNF507Q8TCN5 953 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 CBWD1Q9BRT8 395 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 UBE2ZQ9H832 354 aaPredicted RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 HOOK1Q9UJC3 728 aaKnown RBP15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 COG5Q9UP83 839 aa15.84■□□□□ 0.13
TOP1MT-203ENST00000517857 GOLGA8IPA6NC78 632 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 C2orf71A6NGG8 1288 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 GOLGA8JA6NMD2 632 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 PODXLO00592 558 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 NCK2O43639 380 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 B3GAT3O94766 335 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 LDHAP00338 332 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 GLUD2P49448 558 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 NDUFV1P49821 464 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 STK4Q13043 487 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 PNOCQ13519 176 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 SNW1Q13573 536 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 CD302Q8IX05 232 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 KIAA0895Q8NCT3 520 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 ENGASEQ8NFI3 743 aa15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 PABPC5Q96DU9 382 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 MRPL17Q9NRX2 175 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 UBQLN1Q9UMX0 589 aaKnown RBP15.83■□□□□ 0.12
TOP1MT-203ENST00000517857 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 KIAA0391O15091 583 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 LINC01565O15544 149 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 NFICP08651 508 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 SRGAP2BP0DMP2 458 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 KCNA5P22460 613 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 HOXD13P35453 343 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 CYP2J2P51589 502 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 TFF2Q03403 129 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 ELAVL2Q12926 359 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 TMEM132DQ14C87 1099 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 DUSP6Q16828 381 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 UPP1Q16831 310 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 BMT2Q1RMZ1 405 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 USP41Q3LFD5 358 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 JADE1Q6IE81 842 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 DCLRE1AQ6PJP8 1040 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 GPD1LQ8N335 351 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 MRPL43Q8N983 215 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 BEST2Q8NFU1 509 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 B3GALT6Q96L58 329 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 CDCA3Q99618 268 aaPredicted RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 EMILIN2Q9BXX0 1053 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 GPR62Q9BZJ7 368 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 AGPAT3Q9NRZ7 376 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 RBAKQ9NYW8 714 aaPredicted RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 HSPBP1Q9NZL4 362 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 SSX2IPQ9Y2D8 614 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 NUB1Q9Y5A7 615 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 VWA8A3KMH1 1905 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 BRWD1Q9NSI6 2320 aa15.82■□□□□ 0.12
TOP1MT-203ENST00000517857 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 CLIC2O15247 247 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 EXTL3O43909 919 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 RHOBTB3O94955 611 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 KIF20AO95235 890 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 IL18RAPO95256 599 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 SMC2O95347 1197 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 RPL9P32969 192 aaKnown RBP15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 UBE2HP62256 183 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 AAK1Q2M2I8 961 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 FAM171A1Q5VUB5 890 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 CRELD2Q6UXH1 353 aaPredicted RBP15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 TAS1R1Q7RTX1 841 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 BRSK2Q8IWQ3 736 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 EFHBQ8N7U6 833 aa15.81■□□□□ 0.12
TOP1MT-203ENST00000517857 ZSWIM2Q8NEG5 633 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms